RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 FOXQ1Q9C009 403 aa9.87□□□□□ -0.83
MRPL55-216ENST00000366744 C8orf33Q9H7E9 229 aaPredicted RBP9.87□□□□□ -0.83
MRPL55-216ENST00000366744 APOBEC3GQ9HC16 384 aaKnown RBP9.87□□□□□ -0.83
MRPL55-216ENST00000366744 COMMD8Q9NX08 183 aa9.87□□□□□ -0.83
MRPL55-216ENST00000366744 HESX1Q9UBX0 185 aa9.87□□□□□ -0.83
MRPL55-216ENST00000366744 NME7Q9Y5B8 376 aa9.87□□□□□ -0.83
MRPL55-216ENST00000366744 NCANO14594 1321 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 CACNA1IQ9P0X4 2223 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 NRG2O14511 850 aaPredicted RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 TADA3O75528 432 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 TPM2P07951 284 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 MBL2P11226 248 aaPredicted RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 CD19P15391 556 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 NPR3P17342 541 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 BMP6P22004 513 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 MTIF2P46199 727 aaKnown RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 MARSP56192 900 aaKnown RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 LRMPQ12912 555 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 TAF10Q12962 218 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 USP4Q13107 963 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 PPP2R5DQ14738 602 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 MTF1Q14872 753 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 SGO2Q562F6 1265 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 TMEM150AQ86TG1 271 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 TADA2BQ86TJ2 420 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 RALGPS2Q86X27 583 aaPredicted RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 GPIHBP1Q8IV16 184 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 DTWD2Q8NBA8 298 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 FAM3CQ92520 227 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 SEMA4DQ92854 862 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 USP13Q92995 863 aaPredicted RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 ATP2A3Q93084 1043 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 TMEM176AQ96HP8 235 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 FAM81BQ96LP2 452 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 HNRNPABQ99729 332 aaKnown RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 ARID3AQ99856 593 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 DUSP9Q99956 384 aaKnown RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 IER2Q9BTL4 223 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 PNPLA8Q9NP80 782 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 LTB4R2Q9NPC1 389 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 TLR8Q9NR97 1041 aaKnown RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 SPATA6Q9NWH7 488 aaPredicted RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 GCNT4Q9P109 453 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 NDRG2Q9UN36 371 aaKnown RBP9.86□□□□□ -0.83
MRPL55-216ENST00000366744 ARHGAP26Q9UNA1 814 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 COQ4Q9Y3A0 265 aa9.86□□□□□ -0.83
MRPL55-216ENST00000366744 C2orf78A6NCI8 922 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 ZNF840PA6NDX5 716 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 FAM170BA6NMN3 283 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 PES1O00541 588 aaKnown RBP9.85□□□□□ -0.83
MRPL55-216ENST00000366744 SLC9A3R1O14745 358 aaPredicted RBP9.85□□□□□ -0.83
MRPL55-216ENST00000366744 PMM2O15305 246 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 NFATC1O95644 943 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 DCNP07585 359 aaKnown RBP9.85□□□□□ -0.83
MRPL55-216ENST00000366744 TUBP50607 506 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 CACNA2D1P54289 1103 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 BCAT1P54687 386 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 MLLT6P55198 1093 aaPredicted RBP9.85□□□□□ -0.83
MRPL55-216ENST00000366744 USP46P62068 366 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 KCNH2Q12809 1159 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 NR1H3Q13133 447 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 GOLGA7BQ2TAP0 167 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 HECTD3Q5T447 861 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 ZC3H14Q6PJT7 736 aaKnown RBP9.85□□□□□ -0.83
MRPL55-216ENST00000366744 CLEC20AQ6ZU45 233 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 TRIM59Q8IWR1 403 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 ARL14EPQ8N8R7 260 aaPredicted RBP9.85□□□□□ -0.83
MRPL55-216ENST00000366744 C12orf29Q8N999 325 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 PRSS33Q8NF86 280 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 SH3RF2Q8TEC5 729 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 ATOH1Q92858 354 aaPredicted RBP9.85□□□□□ -0.83
MRPL55-216ENST00000366744 RSPRY1Q96DX4 576 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 ZFYVE19Q96K21 471 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 TWNKQ96RR1 684 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 CDK5RAP1Q96SZ6 601 aaKnown RBP9.85□□□□□ -0.83
MRPL55-216ENST00000366744 KCNK16Q96T55 309 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 DUS2Q9NX74 493 aaKnown RBP9.85□□□□□ -0.83
MRPL55-216ENST00000366744 CCL26Q9Y258 94 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 ATG2BQ96BY7 2078 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 MYOFQ9NZM1 2061 aa9.85□□□□□ -0.83
MRPL55-216ENST00000366744 SPECC1L-ADORA2AF8WAN1 911 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 LAMTOR5O43504 91 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 KRT5P13647 590 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 PRKCSHP14314 528 aaPredicted RBP9.84□□□□□ -0.83
MRPL55-216ENST00000366744 ACO1P21399 889 aaKnown RBP9.84□□□□□ -0.83
MRPL55-216ENST00000366744 CD72P21854 359 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 ERCC5P28715 1186 aaPredicted RBP9.84□□□□□ -0.83
MRPL55-216ENST00000366744 CTHP32929 405 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 PSEN1P49768 467 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 MCCD1P59942 119 aaPredicted RBP9.84□□□□□ -0.83
MRPL55-216ENST00000366744 NHLH1Q02575 133 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 GCNT1Q02742 428 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 ANGPT1Q15389 498 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 STILQ15468 1287 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 ZNF77Q15935 545 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 DPCR1Q3MIW9 517 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 IER5LQ5T953 404 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 TMEM270Q6UE05 265 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 SASS6Q6UVJ0 657 aa9.84□□□□□ -0.83
MRPL55-216ENST00000366744 SIX6OS1Q8N1H7 587 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms