RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 ZNF518BQ9C0D4 1074 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 MIS12Q9H081 205 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 ZCWPW1Q9H0M4 648 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 LHX5Q9H2C1 402 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 SYNCQ9H7C4 482 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 CRTAC1Q9NQ79 661 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 CHST7Q9NS84 486 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 KRT82Q9NSB4 513 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 NAGPAQ9UK23 515 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 STRIP2Q9ULQ0 834 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 PYCARDQ9ULZ3 195 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 LZTS1Q9Y250 596 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 PPP2R2CQ9Y2T4 447 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 NME7Q9Y5B8 376 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 PCDHA13Q9Y5I0 950 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 BACE2Q9Y5Z0 518 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 R4GN57 208 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 COL4A3Q01955 1670 aa7.16□□□□□ -1.26
RNU1-55P-201ENST00000365510 MYBPHLA2RUH7 354 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 TMCO5BA8MYB1 307 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 STK25O00506 426 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 C2CD2LO14523 706 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ATP2C2O75185 946 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 RTN2O75298 545 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 AP1G2O75843 785 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 EFEMP2O95967 443 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 CYP1A1P04798 512 aaPredicted RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 CALB1P05937 261 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 H2AFZP0C0S5 128 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 CDH5P33151 784 aaPredicted RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 MAGEA1P43355 309 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 VAV2P52735 878 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 SNX16P57768 344 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 NOMO3P69849 1222 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 UBE3AQ05086 875 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 C1QBPQ07021 282 aaKnown RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 BST2Q10589 180 aaKnown RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 PDCLQ13371 301 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 MRPL58Q14197 206 aaKnown RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 SLC39A12Q504Y0 691 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ARHGAP29Q52LW3 1261 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 KIAA0319Q5VV43 1072 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 CWF19L1Q69YN2 538 aaKnown RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ACAD10Q6JQN1 1059 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 DENND1BQ6P3S1 775 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 FAM171BQ6P995 826 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 PRSS55Q6UWB4 352 aaPredicted RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 H2AFVQ71UI9 128 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 FAM35AQ86V20 835 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 PALB2Q86YC2 1186 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 GPR65Q8IYL9 337 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 FUKQ8N0W3 1084 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ANKRD52Q8NB46 1076 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 SLC30A5Q8TAD4 765 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 C2orf15Q8WU43 125 aaKnown RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 CTNNBL1Q8WYA6 563 aaPredicted RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 SECISBP2LQ93073 1101 aaKnown RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ZNF653Q96CK0 615 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 FUBP3Q96I24 572 aaKnown RBP eCLIP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 PCDHB18PQ96TA0 734 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 PKMYT1Q99640 499 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 HNRNPABQ99729 332 aaKnown RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ZSWIM1Q9BR11 485 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 RPP25Q9BUL9 199 aaKnown RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ZBP1Q9H171 429 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ABCB6Q9NP58 842 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 DMAP1Q9NPF5 467 aaPredicted RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 MRPL17Q9NRX2 175 aaKnown RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ABI2Q9NYB9 513 aaPredicted RBP7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 MTRRQ9UBK8 725 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 INTUQ9ULD6 942 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 NENFQ9UMX5 172 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 ADGRG1Q9Y653 693 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 CDY1Q9Y6F8 540 aa7.15□□□□□ -1.26
RNU1-55P-201ENST00000365510 VWA8A3KMH1 1905 aa7.15□□□□□ -1.27
RNU1-55P-201ENST00000365510 CACNA1IQ9P0X4 2223 aa7.15□□□□□ -1.27
RNU1-55P-201ENST00000365510 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 MED19A0JLT2 244 aaPredicted RBP7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 KRBA1A5PL33 1030 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 ANKRD62A6NC57 917 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 CLDN5O00501 218 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 NCANO14594 1321 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 ZNF263O14978 683 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 XPO1O14980 1071 aaKnown RBP7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 TRIM66O15016 1216 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 KRT86O43790 486 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 FTLP02792 175 aaPredicted RBP7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 CFHP08603 1231 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 OR4Q2P0C623 313 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 TMEM253P0C7T8 217 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 CTSAP10619 480 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 UNGP13051 313 aaPredicted RBP7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 ABCB4P21439 1286 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 PLA2G4AP47712 749 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 ARPP19P56211 112 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 ROR1Q01973 937 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 KIF5AQ12840 1032 aa7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 SMC1AQ14683 1233 aaKnown RBP7.14□□□□□ -1.27
RNU1-55P-201ENST00000365510 PTPN14Q15678 1187 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms