RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SDCCAG3Q96C92 435 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 TEX13BQ9BXU2 312 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 KAT6AQ92794 2004 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 ZC3H11AO75152 810 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL6A1-201ENST00000361866 AVILO75366 819 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 MT-CO1P00395 513 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 HSPA8P11142 646 aaKnown RBP14.43□□□□□ -0.1
COL6A1-201ENST00000361866 GLRA2P23416 452 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 ABCG1P45844 678 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 ALYREFQ86V81 257 aaKnown RBP14.43□□□□□ -0.1
COL6A1-201ENST00000361866 RXFP2Q8WXD0 754 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 DCPSQ96C86 337 aaKnown RBP14.43□□□□□ -0.1
COL6A1-201ENST00000361866 NMRK1Q9NWW6 199 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 HOXC10Q9NYD6 342 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 ARHGAP26Q9UNA1 814 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 LZTS1Q9Y250 596 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 MYH6P13533 1939 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 PHKA2P46019 1235 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 SERPINB9P50453 376 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 AP3M2P53677 418 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 TMEM62Q0P6H9 643 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 TRMT5Q32P41 509 aaKnown RBP14.43□□□□□ -0.1
COL6A1-201ENST00000361866 EML3Q32P44 896 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 IRGCQ6NXR0 463 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 NPNTQ6UXI9 565 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 USP13Q92995 863 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-201ENST00000361866 STXBP5LQ9Y2K9 1186 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 CAP2P40123 477 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 NUMBP49757 651 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 ATF7IP2Q5U623 682 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 KATNAL2Q8IYT4 538 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 VPS39Q96JC1 886 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 CLPTM1LQ96KA5 538 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 C17orf75Q9HAS0 396 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 CASZ1Q86V15 1759 aa14.43□□□□□ -0.1
COL6A1-201ENST00000361866 DCXO43602 365 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 SNHG28P0DPA3 235 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 ATP6V1C1P21283 382 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 RPL22P35268 128 aaKnown RBP14.42□□□□□ -0.1
COL6A1-201ENST00000361866 BST1Q10588 318 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 VSTM1Q6UX27 236 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 CLNKQ7Z7G1 428 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 CCT7Q99832 543 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 AKAP10O43572 662 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 MUTP22033 750 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 CRADDP78560 199 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 MAP4K3Q8IVH8 894 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 TMEM161BQ8NDZ6 487 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 LPAR1Q92633 364 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 APOPT1Q96IL0 206 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 FAM167AQ96KS9 214 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 GCNAQ96QF7 691 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 FSD1LQ9BXM9 530 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 GCOM2Q9BZD3 368 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-201ENST00000361866 SAR1AQ9NR31 198 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 CHKBQ9Y259 395 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 PCDHA2Q9Y5H9 948 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 USP1O94782 785 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 PGM3O95394 542 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 C16orf87Q6PH81 154 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 ARMCX2Q7L311 632 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 SLITRK1Q96PX8 696 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 ING2Q9H160 280 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 C2orf40Q9H1Z8 148 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 CORO1CQ9ULV4 474 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-201ENST00000361866 SOX13Q9UN79 622 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 V9GYQ6 96 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 OATP04181 439 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 CYP3A4P08684 503 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 MIPP30301 263 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 CA8P35219 290 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 GSCP56915 257 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-201ENST00000361866 UGCGQ16739 394 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 KHDC1Q4VXA5 237 aaKnown RBP14.42□□□□□ -0.1
COL6A1-201ENST00000361866 DCAF6Q58WW2 860 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 N4BP2L1Q5TBK1 243 aaPredicted RBP14.42□□□□□ -0.1
COL6A1-201ENST00000361866 SLC9A9Q8IVB4 645 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 SEPT1Q8WYJ6 367 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 THAP11Q96EK4 314 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 HPDLQ96IR7 371 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 TSR3Q9UJK0 312 aaKnown RBP14.42□□□□□ -0.1
COL6A1-201ENST00000361866 NOD1Q9Y239 953 aa14.42□□□□□ -0.1
COL6A1-201ENST00000361866 WDR4P57081 412 aaKnown RBP14.41□□□□□ -0.1
COL6A1-201ENST00000361866 TAF12Q16514 161 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 GLRA4Q5JXX5 417 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 DEFB132Q7Z7B7 95 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 DPP9Q86TI2 863 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 FAM131BQ86XD5 332 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 OR5B17Q8NGF7 314 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 FAM172AQ8WUF8 416 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 NT5C1AQ9BXI3 368 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 CLPTM1O96005 669 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 MOCS2O96007 188 aaPredicted RBP14.41□□□□□ -0.1
COL6A1-201ENST00000361866 EEF1DP29692 281 aaKnown RBP14.41□□□□□ -0.1
COL6A1-201ENST00000361866 CLCN3P51790 818 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 GTF2BQ00403 316 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 NFIL3Q16649 462 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 EFHC2Q5JST6 749 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 KLC3Q6P597 504 aa14.41□□□□□ -0.1
COL6A1-201ENST00000361866 ACOT1Q86TX2 421 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms