RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 ZNF571Q7Z3V5 609 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 RPRD1AQ96P16 312 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 SPATA16Q9BXB7 569 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 RIC8BQ9NVN3 520 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 PCDHGB4Q9UN71 923 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 MYO1CO00159 1063 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 DNAJC8O75937 253 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 MBL2P11226 248 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 GFAPP14136 432 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 EARS2Q5JPH6 523 aaKnown RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 EIF1ADQ8N9N8 165 aaKnown RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 ETNPPLQ8TBG4 499 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 C18orf25Q96B23 403 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 C12orf42Q96LP6 360 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 LRRC40Q9H9A6 602 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 SARS2Q9NP81 518 aaKnown RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 C20orf96Q9NUD7 363 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 DDX43Q9NXZ2 648 aaKnown RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 SNTG2Q9NY99 539 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 USP18Q9UMW8 372 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 CDY1Q9Y6F8 540 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 EML1O00423 815 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 IRF6O14896 467 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 PPFIA2O75334 1257 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 KLHL2O95198 593 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 CCR1P32246 355 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 SSTR3P32745 418 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 CNTN2Q02246 1040 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 TBX2Q13207 712 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 STX3Q13277 289 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 ITGA9Q13797 1035 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 DNAL1Q4LDG9 190 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 BEND6Q5SZJ8 279 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-202ENST00000361603 SPATA21Q7Z572 469 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 HAS1Q92839 578 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 NRBF2Q96F24 287 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 ELMO2Q96JJ3 720 aa11.85□□□□□ -0.51
COL4A5-202ENST00000361603 SDR42E2A6NKP2 422 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 ZNF185O15231 689 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 LRRC38Q5VT99 294 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 MTO1Q9Y2Z2 717 aaKnown RBP11.84□□□□□ -0.51
COL4A5-202ENST00000361603 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.84□□□□□ -0.51
COL4A5-202ENST00000361603 FKTNO75072 461 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 ICAM3P32942 547 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 PSEN1P49768 467 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 CMTM5Q96DZ9 223 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 MS4A14Q96JA4 679 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 INPP4AQ96PE3 977 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-202ENST00000361603 PRKD2Q9BZL6 878 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 ENTPD7Q9NQZ7 604 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 LTBP3Q9NS15 1303 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 CNTNAP2Q9UHC6 1331 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 CSPG5O95196 566 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 CRTAMO95727 393 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 HMBSP08397 361 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 HMOX2P30519 316 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 SP3Q02447 781 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 SMARCB1Q12824 385 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 MDH1BQ5I0G3 518 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 GLRA4Q5JXX5 417 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 ANKMY2Q8IV38 441 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 PPTC7Q8NI37 304 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-202ENST00000361603 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.84□□□□□ -0.51
COL4A5-202ENST00000361603 PCDH9Q9HC56 1237 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 SLC24A2Q9UI40 661 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 SHOC2Q9UQ13 582 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 STX7O15400 261 aaKnown RBP11.84□□□□□ -0.51
COL4A5-202ENST00000361603 XYLBO75191 536 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 GRAP2O75791 330 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 RARGP13631 454 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 TKTL1P51854 596 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 CRYBB1P53674 252 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-202ENST00000361603 ERMARDQ5T6L9 678 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 HIBCHQ6NVY1 386 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-202ENST00000361603 ZNF662Q6ZS27 426 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 ZNF606Q8WXB4 792 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 GPR63Q9BZJ6 419 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 EPN3Q9H201 632 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 PABPC3Q9H361 631 aaKnown RBP11.84□□□□□ -0.51
COL4A5-202ENST00000361603 SOAT2O75908 522 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 HSD17B14Q9BPX1 270 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 DCDC2Q9UHG0 476 aa11.84□□□□□ -0.51
COL4A5-202ENST00000361603 GLRA3O75311 464 aa11.83□□□□□ -0.51
COL4A5-202ENST00000361603 AKT1P31749 480 aa11.83□□□□□ -0.51
COL4A5-202ENST00000361603 ADCYAP1R1P41586 468 aa11.83□□□□□ -0.51
COL4A5-202ENST00000361603 SPDL1Q96EA4 605 aa11.83□□□□□ -0.51
COL4A5-202ENST00000361603 HSFY1Q96LI6 401 aa11.83□□□□□ -0.51
COL4A5-202ENST00000361603 ARHGAP20Q9P2F6 1191 aa11.83□□□□□ -0.51
COL4A5-202ENST00000361603 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-202ENST00000361603 RNASEH1O60930 286 aaKnown RBP11.83□□□□□ -0.52
COL4A5-202ENST00000361603 FAM83EQ2M2I3 478 aa11.83□□□□□ -0.52
COL4A5-202ENST00000361603 ICE2Q659A1 982 aa11.83□□□□□ -0.52
COL4A5-202ENST00000361603 RETSATQ6NUM9 610 aa11.83□□□□□ -0.52
COL4A5-202ENST00000361603 FAM47EQ6ZV65 393 aa11.83□□□□□ -0.52
COL4A5-202ENST00000361603 LRRC49Q8IUZ0 686 aa11.83□□□□□ -0.52
COL4A5-202ENST00000361603 CCDC60Q8IWA6 550 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-202ENST00000361603 CYP2W1Q8TAV3 490 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms