RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 RGMBQ6NW40 437 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 ZNF557Q8N988 423 aaPredicted RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 PCYOX1LQ8NBM8 494 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 SMYD3Q9H7B4 428 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 DMAP1Q9NPF5 467 aaPredicted RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 PCMTD2Q9NV79 361 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 MROH7Q68CQ1 1323 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 RNF103-CHMP3A0A140T963 221 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 TCP11X1B4DZS4 312 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 IGF2BP3O00425 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
LDB3-202ENST00000361373 RHOBTB1O94844 696 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 HMGCRP04035 888 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 CHRM3P20309 590 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 ADCYAP1R1P41586 468 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 ARL4DP49703 201 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 DNAL1Q4LDG9 190 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 EARS2Q5JPH6 523 aaKnown RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 ZNF571Q7Z3V5 609 aaPredicted RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 HIPK4Q8NE63 616 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 RIN2Q8WYP3 895 aaPredicted RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 TRIM17Q9Y577 477 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 LOC102724159A0A0B4J2E5 919 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 TBKBP1A7MCY6 615 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 GOLGA8RI6L899 631 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 EML1O00423 815 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 TGM2P21980 687 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 MAP2K5Q13163 448 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 PWP2Q15269 919 aaKnown RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 RETSATQ6NUM9 610 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 SPOCD1Q6ZMY3 1216 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 RRM2BQ7LG56 351 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 UNC93AQ86WB7 457 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 ST13P4Q8IZP2 240 aaPredicted RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 TSPAN18Q96SJ8 248 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 CHST12Q9NRB3 414 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 FAF1Q9UNN5 650 aaPredicted RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 FAM237AA0A1B0GTK4 181 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 RHOCP08134 193 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 ATXN8OSP0DMR3 200 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 EIF4BP23588 611 aaKnown RBP13.96□□□□□ -0.17
LDB3-202ENST00000361373 CARSP49589 748 aaKnown RBP13.96□□□□□ -0.17
LDB3-202ENST00000361373 RENBPP51606 427 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 EFEMP1Q12805 493 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 BTG3Q14201 252 aaPredicted RBP13.96□□□□□ -0.17
LDB3-202ENST00000361373 AGAP9Q5VTM2 703 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 C1orf186Q6ZWK4 172 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 APBB2Q92870 758 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 EPN3Q9H201 632 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 PABPC3Q9H361 631 aaKnown RBP13.96□□□□□ -0.17
LDB3-202ENST00000361373 CNTFP26441 200 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 NDST1P52848 882 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 SLC47A2Q86VL8 602 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 MCOLN2Q8IZK6 566 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 TTC30BQ8N4P2 665 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 UROC1Q96N76 676 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 SERPINB11Q96P15 392 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 FAM167BQ9BTA0 163 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 MTO1Q9Y2Z2 717 aaKnown RBP13.96□□□□□ -0.17
LDB3-202ENST00000361373 RPS6KL1Q9Y6S9 549 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 BCL9LQ86UU0 1499 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 ATRNO75882 1429 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 CASTOR2A6NHX0 329 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 TTLL13PA6NNM8 815 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 EIF3HO15372 352 aaKnown RBP eCLIP13.96□□□□□ -0.17
LDB3-202ENST00000361373 CLASP2O75122 1294 aaKnown RBP13.96□□□□□ -0.17
LDB3-202ENST00000361373 CRTAMO95727 393 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 FGRP09769 529 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 RTP1P59025 263 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 YWHAZP63104 245 aaKnown RBP13.96□□□□□ -0.17
LDB3-202ENST00000361373 ANO5Q75V66 913 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 CATSPER1Q8NEC5 780 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 TEKT4Q8WW24 435 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 FUCA2Q9BTY2 467 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 TSPAN16Q9UKR8 245 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 TNFSF13BQ9Y275 285 aa13.96□□□□□ -0.17
LDB3-202ENST00000361373 GYS2P54840 703 aa13.96□□□□□ -0.18
LDB3-202ENST00000361373 HIST2H2ACQ16777 129 aaPredicted RBP13.96□□□□□ -0.18
LDB3-202ENST00000361373 PREPLQ4J6C6 727 aaPredicted RBP13.96□□□□□ -0.18
LDB3-202ENST00000361373 COBLL1Q53SF7 1204 aa13.96□□□□□ -0.18
LDB3-202ENST00000361373 HIST2H2AA3Q6FI13 130 aa13.96□□□□□ -0.18
LDB3-202ENST00000361373 VPS37AQ8NEZ2 397 aa13.96□□□□□ -0.18
LDB3-202ENST00000361373 FAM161BQ96MY7 647 aa13.96□□□□□ -0.18
LDB3-202ENST00000361373 ADGRE3Q9BY15 652 aa13.96□□□□□ -0.18
LDB3-202ENST00000361373 CELF4Q9BZC1 486 aaKnown RBP13.96□□□□□ -0.18
LDB3-202ENST00000361373 TRMT6Q9UJA5 497 aaKnown RBP13.96□□□□□ -0.18
LDB3-202ENST00000361373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.96□□□□□ -0.18
LDB3-202ENST00000361373 MEIS2O14770 477 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 CHN1P15882 459 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 OTUD4Q01804 1114 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 TRIML2Q8N7C3 387 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 XPO6Q96QU8 1125 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 APBA2Q99767 749 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 ING2Q9H160 280 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 ARHGAP20Q9P2F6 1191 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 SUPT3HB4E1H0 165 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 PQBP1O60828 265 aaKnown RBP13.95□□□□□ -0.18
LDB3-202ENST00000361373 MAGEA9P43362 315 aa13.95□□□□□ -0.18
LDB3-202ENST00000361373 HIC1Q14526 733 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms