RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-203ENST00000359895 TRPV2Q9Y5S1 764 aa19.16■□□□□ 0.66
PDLIM7-203ENST00000359895 NDUFAB1O14561 156 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 HUS1O60921 280 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 ABHD2P08910 425 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 C6orf222P0C671 652 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 LRPAP1P30533 357 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 SDC4P31431 198 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 MMP13P45452 471 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 ACADSBP45954 432 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 DYNLT1P63172 113 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 PDE4CQ08493 712 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 CRHR2Q13324 411 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 KYNUQ16719 465 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 TWF2Q6IBS0 349 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 PAXIP1Q6ZW49 1069 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 ARCQ7LC44 396 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 FAM228AQ86W67 206 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 HACE1Q8IYU2 909 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 TOP6BLQ8N6T0 577 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 KBTBD7Q8WVZ9 684 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 TNIP3Q96KP6 325 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 TBCBQ99426 244 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 TMEM121Q9BTD3 319 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 RNF39Q9H2S5 420 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 SPC25Q9HBM1 224 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 RSPH14Q9UHP6 348 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 SMIM23A6NLE4 172 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 DCDC2CA8MYV0 355 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 SMAPO00193 183 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 EBAG9O00559 213 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 MCF2LO15068 1137 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 RPL34P49207 117 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 CDH6P55285 790 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 FCGRTP55899 365 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 STAT4Q14765 748 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 CCDC14Q49A88 953 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 UBAP2Q5T6F2 1119 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 TRNP1Q6NT89 227 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 FOXR1Q6PIV2 292 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 RSAD2Q8WXG1 361 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 PEBP4Q96S96 227 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 RBM15Q96T37 977 aaKnown RBP eCLIP19.15■□□□□ 0.662e-7■□□□□ 9.9
PDLIM7-203ENST00000359895 CALN1Q9BXU9 219 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 PHACTR1Q9C0D0 580 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 UPF3AQ9H1J1 476 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 GTF2IRD1Q9UHL9 959 aa19.15■□□□□ 0.66
PDLIM7-203ENST00000359895 PIK3R2O00459 728 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 CD48P09326 243 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 CYBAP13498 195 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 WARSP23381 471 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 MAGEA4P43358 317 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 PTPN9P43378 593 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 C15orf59Q2T9L4 293 aaPredicted RBP19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 GNASQ5JWF2 1037 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 RNASEH2BQ5TBB1 312 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 CYP4V2Q6ZWL3 525 aaPredicted RBP19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 PRUNE1Q86TP1 453 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 GLIS1Q8NBF1 620 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 TRPV1Q8NER1 839 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 CFAP57Q96MR6 1250 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 DPEP3Q9H4B8 488 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 CHST12Q9NRB3 414 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 SLC38A7Q9NVC3 462 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 CDY2AQ9Y6F7 541 aa19.14■□□□□ 0.65
PDLIM7-203ENST00000359895 CASP8AP2Q9UKL3 1982 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 PCNTO95613 3336 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 FAM155AB1AL88 458 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 ZNF487B1APH4 448 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 TULP2O00295 520 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 SPTLC1O15269 473 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 PAPSS1O43252 624 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 CA12O43570 354 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 IFNB1P01574 187 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 ZSCAN5DPP0CG00 497 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 FGFR1P11362 822 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 CCT5P48643 541 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 EIF3EP60228 445 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 NKX3-2P78367 333 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 SOX4Q06945 474 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 KRT81Q14533 505 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 TAF5Q15542 800 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 CYP4F22Q6NT55 531 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 B4GALNT4Q76KP1 1039 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 SLC26A9Q7LBE3 791 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 NLRP14Q86W24 1093 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 SPATS2Q86XZ4 545 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 ADGRF2Q8IZF7 708 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 PIWIL1Q96J94 861 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 HSFY1Q96LI6 401 aa19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 DNAJC17Q9NVM6 304 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-203ENST00000359895 A0A087WUV0 522 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 GMNCA6NCL1 334 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 MYADML2A6NDP7 307 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 E7EVH7 732 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 MDM4O15151 490 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 TRAPPC3O43617 180 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 GRAP2O75791 330 aa19.12■□□□□ 0.65
PDLIM7-203ENST00000359895 FAM107AO95990 144 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms