RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 SEPT6Q14141 434 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 CDKL3Q8IVW4 592 aaPredicted RBP14.85□□□□□ -0.03
SIRPA-202ENST00000358771 GOLGA2P5Q9HBQ8 144 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 GBA2Q9HCG7 927 aaPredicted RBP14.85□□□□□ -0.03
SIRPA-202ENST00000358771 ZDHHC18Q9NUE0 388 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 ZFP69BQ9UJL9 534 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 FIS1Q9Y3D6 152 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 SIGLEC16A6NMB1 481 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 RPS6KA5O75582 802 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 MAP2K2P36507 400 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 TAF6P49848 677 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 BMPR2Q13873 1038 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 KYAT1Q16773 422 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 ZC3H12AQ5D1E8 599 aaKnown RBP14.84□□□□□ -0.03
SIRPA-202ENST00000358771 FBXO47Q5MNV8 452 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 NXNQ6DKJ4 435 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 PARP9Q8IXQ6 854 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 GBP7Q8N8V2 638 aaPredicted RBP14.84□□□□□ -0.03
SIRPA-202ENST00000358771 CFAP61Q8NHU2 1237 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 SLC2A14Q8TDB8 520 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 DDX1Q92499 740 aaKnown RBP14.84□□□□□ -0.03
SIRPA-202ENST00000358771 RAB3IPQ96QF0 476 aaPredicted RBP14.84□□□□□ -0.03
SIRPA-202ENST00000358771 PCYT2Q99447 389 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 UBQLN1Q9UMX0 589 aaKnown RBP14.84□□□□□ -0.03
SIRPA-202ENST00000358771 hCG_1818297A0A087WSY0 165 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 DEUP1Q05D60 604 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 ERMARDQ5T6L9 678 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 ICE2Q659A1 982 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 C18orf25Q96B23 403 aaPredicted RBP14.84□□□□□ -0.03
SIRPA-202ENST00000358771 CD248Q9HCU0 757 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 TXLNGQ9NUQ3 528 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 PAK5Q9P286 719 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 LRCH4O75427 683 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 BAG2O95816 211 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 HMGCRP04035 888 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 ERBB2P04626 1255 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 ESRRAP11474 423 aaPredicted RBP14.84□□□□□ -0.03
SIRPA-202ENST00000358771 YY1P25490 414 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 ZNF268Q14587 947 aaPredicted RBP14.84□□□□□ -0.03
SIRPA-202ENST00000358771 STILQ15468 1287 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 DENND5BQ6ZUT9 1274 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 GLIS1Q8NBF1 620 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 R3HDMLQ9H3Y0 253 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 CYP3A43Q9HB55 503 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 SMG5Q9UPR3 1016 aaKnown RBP14.84□□□□□ -0.03
SIRPA-202ENST00000358771 GRIN2DO15399 1336 aa14.84□□□□□ -0.03
SIRPA-202ENST00000358771 NCAM1P13591 858 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 RBL1P28749 1068 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 STIP1P31948 543 aaKnown RBP14.83□□□□□ -0.03
SIRPA-202ENST00000358771 ARFIP2P53365 341 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 CNGA2Q16280 664 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 ARL13BQ3SXY8 428 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 FAM183BPQ6ZVS7 135 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 NUDCD3Q8IVD9 361 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 ZBED3Q96IU2 234 aaPredicted RBP14.83□□□□□ -0.03
SIRPA-202ENST00000358771 APOL2Q9BQE5 337 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 ELOVL4Q9GZR5 314 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 ABHD16BQ9H3Z7 469 aa14.83□□□□□ -0.03
SIRPA-202ENST00000358771 RRN3P2A6NIE6 340 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 SHOX2O60902 331 aaPredicted RBP14.83□□□□□ -0.04
SIRPA-202ENST00000358771 B3GAT3O94766 335 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 RPL22P35268 128 aaKnown RBP14.83□□□□□ -0.04
SIRPA-202ENST00000358771 SDCCAG8Q86SQ7 713 aaPredicted RBP14.83□□□□□ -0.04
SIRPA-202ENST00000358771 DCLK2Q8N568 766 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 FOXP3Q9BZS1 431 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 HAPLN2Q9GZV7 340 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 ABCF3Q9NUQ8 709 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.83□□□□□ -0.042e-6■■■□□ 16.7
SIRPA-202ENST00000358771 SENP1Q9P0U3 644 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 ZNF112Q9UJU3 913 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 PHTF1Q9UMS5 762 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 AVILO75366 819 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 HADHBP55084 474 aaKnown RBP14.83□□□□□ -0.04
SIRPA-202ENST00000358771 COPS2P61201 443 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 SH3PXD2AQ5TCZ1 1133 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 BZW1Q7L1Q6 419 aaKnown RBP14.83□□□□□ -0.04
SIRPA-202ENST00000358771 TWNKQ96RR1 684 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 NXF3Q9H4D5 531 aaKnown RBP14.83□□□□□ -0.04
SIRPA-202ENST00000358771 AP4E1Q9UPM8 1137 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 CHUKO15111 745 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 CIB2O75838 187 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 CD4P01730 458 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 AMPD1P23109 780 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 SLC8A1P32418 973 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 MAP3K7CLP57077 242 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 PPP1R26Q5T8A7 1209 aaPredicted RBP14.83□□□□□ -0.04
SIRPA-202ENST00000358771 ZDHHC14Q8IZN3 488 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 ABI1Q8IZP0 508 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 ZCCHC9Q8N567 271 aaKnown RBP14.83□□□□□ -0.04
SIRPA-202ENST00000358771 PDCD7Q8N8D1 485 aaKnown RBP14.83□□□□□ -0.04
SIRPA-202ENST00000358771 RNF139Q8WU17 664 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 TINF2Q9BSI4 451 aa14.83□□□□□ -0.04
SIRPA-202ENST00000358771 SCN9AQ15858 1988 aa14.82□□□□□ -0.04
SIRPA-202ENST00000358771 KBTBD13C9JR72 458 aa14.82□□□□□ -0.04
SIRPA-202ENST00000358771 PAEPP09466 180 aa14.82□□□□□ -0.04
SIRPA-202ENST00000358771 ATICP31939 592 aa14.82□□□□□ -0.04
SIRPA-202ENST00000358771 UBAP2Q5T6F2 1119 aaKnown RBP14.82□□□□□ -0.04
SIRPA-202ENST00000358771 SLC27A1Q6PCB7 646 aa14.82□□□□□ -0.04
SIRPA-202ENST00000358771 LRRC6Q86X45 466 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms