RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ALG13Q9NP73 1137 aaKnown RBP8.98□□□□□ -0.97
RFX3-202ENST00000358730 ASNSD1Q9NWL6 643 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 DCTN4Q9UJW0 460 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 IKBKGQ9Y6K9 419 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 KAT6AQ92794 2004 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 LACTBL1A8MY62 500 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 KBTBD13C9JR72 458 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 DIAPH2O60879 1101 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 CILPO75339 1184 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 CSDE1O75534 798 aaKnown RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 BAG6P46379 1132 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 YWHAGP61981 247 aaKnown RBP eCLIP8.97□□□□□ -0.97
RFX3-202ENST00000358730 OVGP1Q12889 678 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 PTK7Q13308 1070 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 DPYSL3Q14195 570 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 NOMO1Q15155 1222 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 CDO1Q16878 200 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 TAF1BQ53T94 588 aaPredicted RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 SH3PXD2AQ5TCZ1 1133 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 EFCAB12Q6NXP0 572 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 PLPPR4Q7Z2D5 763 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 IGDCC3Q8IVU1 814 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 FBXO16Q8IX29 292 aaPredicted RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 BANPQ8N9N5 519 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 INPP5DQ92835 1189 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 ALKBH8Q96BT7 664 aaKnown RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 MCRS1Q96EZ8 462 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 PPP1R16BQ96T49 567 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 CYTH2Q99418 400 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 MPHOSPH6Q99547 160 aaKnown RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 ASCC2Q9H1I8 757 aaPredicted RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 R3HDMLQ9H3Y0 253 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 ZFP69BQ9UJL9 534 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 TNFSF13BQ9Y275 285 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 PPP2R3BQ9Y5P8 575 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 TCRBV9S1A1TA0A576 114 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 GPR25O00155 361 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 C2CD2LO14523 706 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 LPXNO60711 386 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 USP2O75604 605 aaPredicted RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 MT-ND3P03897 115 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 INHBAP08476 426 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 IQCF3P0C7M6 154 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 STAG3L1P0CL83 205 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 GPD1P21695 349 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 ZNF143P52747 638 aaPredicted RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 IGBP1P78318 339 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 ACAP1Q15027 740 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 PARP6Q2NL67 630 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 FAM182AQ5T1J6 154 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 UBA3Q8TBC4 463 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 HEXIM2Q96MH2 286 aaKnown RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 CYLDQ9NQC7 956 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 OTOFQ9HC10 1997 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 IQANK1A0A1B0GTG1 560 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 H7C0C1 242 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 GRAP2O75791 330 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 WFS1O76024 890 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 T-ENOLP0DO92 83 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 TSHRP16473 764 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 EPHB2P29323 1055 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 PCK1P35558 622 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 GPD2P43304 727 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 GABRB2P47870 512 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 ATP5OP48047 213 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 RASSF2P50749 326 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 C15orf59Q2T9L4 293 aaPredicted RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 KBTBD12Q3ZCT8 623 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 RAB6CQ53S08 254 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 SLC45A4Q5BKX6 768 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 ZC3H12AQ5D1E8 599 aaKnown RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 C1orf228Q6PIY5 440 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 DLK2Q6UY11 383 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 MTDHQ86UE4 582 aaKnown RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 COPS5Q92905 334 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 PTPRN2Q92932 1015 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 FAF2Q96CS3 445 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 PIWIL1Q96J94 861 aaKnown RBP8.97□□□□□ -0.97
RFX3-202ENST00000358730 CNPY3Q9BT09 278 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 RAB6CQ9H0N0 254 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 MANSC1Q9H8J5 431 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 GPRC5DQ9NZD1 345 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 LTBP3Q9NS15 1303 aa8.97□□□□□ -0.97
RFX3-202ENST00000358730 A0A0G2JND7 137 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 PRPSAP2O60256 369 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 HMGCRP04035 888 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 NEFHP12036 1026 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 P4HA1P13674 534 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 ZNF200P98182 395 aaPredicted RBP8.96□□□□□ -0.97
RFX3-202ENST00000358730 KRT81Q14533 505 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 KCNJ11Q14654 390 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 NAA25Q14CX7 972 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 PLEKHG4Q58EX7 1191 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 WDR78Q5VTH9 848 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 OR6B2Q6IFH4 312 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 TRNP1Q6NT89 227 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 FAM183BPQ6ZVS7 135 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 RFWD2Q8NHY2 731 aa8.96□□□□□ -0.97
RFX3-202ENST00000358730 ZNF398Q8TD17 642 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms