RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TBCELQ5QJ74 424 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF398Q8TD17 642 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 S100A14Q9HCY8 104 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 F8W8V4 182 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 H0YC42 278 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 UPP2O95045 317 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 SURF1Q15526 300 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 CDO1Q16878 200 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 USP17L2Q6R6M4 530 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 DHRSXQ8N5I4 330 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 S100ZQ8WXG8 99 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 RBM17Q96I25 401 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.29□□□□□ -1.42e-6■■■■■ 35.9
VPS13B-203ENST00000358544 MOV10Q9HCE1 1003 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 KIAA0556O60303 1618 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 NR5A2O00482 541 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 SOX11P35716 441 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 MRPS22P82650 360 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 CSTF3Q12996 717 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF268Q14587 947 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 CAMK1DQ8IU85 385 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PDCD6IPQ8WUM4 868 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 DNAJC1Q96KC8 554 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ABCB10Q9NRK6 738 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 REXO2Q9Y3B8 237 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 GTF3C1Q12789 2109 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 KRT72Q14CN4 511 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 NCCRP1Q6ZVX7 275 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 GCNAQ96QF7 691 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 COPS7BQ9H9Q2 264 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 TMEM260Q9NX78 707 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PSMD13Q9UNM6 376 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 A0A1W2PRG6 482 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PPM1FP49593 454 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 FAM47CQ5HY64 1035 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 KLHL17Q6TDP4 642 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 UBASH3BQ8TF42 649 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PALLDQ8WX93 1383 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ZMYM2Q9UBW7 1377 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 GUCY1B2O75343 617 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TNFRSF21O75509 655 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 RGS20O76081 388 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 PDE8BO95263 885 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 BMP3P12645 472 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 MMRN1Q13201 1228 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 GRM1Q13255 1194 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 GLRA4Q5JXX5 417 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 MFSD14BQ5SR56 506 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SEL1L3Q68CR1 1132 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TTC7BQ86TV6 843 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SEMA6BQ9H3T3 888 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 DHX35Q9H5Z1 703 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 PARVAQ9NVD7 372 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 BTBD3Q9Y2F9 522 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ZBTB5O15062 677 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 LDLRP01130 860 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 PKNOX1P55347 436 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF699Q32M78 642 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 FAM98BQ52LJ0 330 aaKnown RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ATG9AQ7Z3C6 839 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SLC20A1Q8WUM9 679 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 THAP2Q9H0W7 228 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 PCP4L1A6NKN8 68 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 PON1P27169 355 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 PDPK2PQ6A1A2 396 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SNX31Q8N9S9 440 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 MINDY2Q8NBR6 621 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 DCAF4Q8WV16 495 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ADAM30Q9UKF2 790 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SLC39A10Q9ULF5 831 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 A0A1W2PQ72 361 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ALAS1P13196 640 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 IFNA8P32881 189 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 UGP2Q16851 508 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF221Q9UK13 617 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TP53BP1Q12888 1972 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SNTNA6NMZ2 147 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 H7C1W4 665 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 C2CD2LO14523 706 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ME2P23368 584 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 HOXA13P31271 388 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-203ENST00000358544 KLHL12Q53G59 568 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SYTL1Q8IYJ3 562 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 CPA5Q8WXQ8 436 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 RAB26Q9ULW5 256 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 GJB6O95452 261 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 PROCP04070 461 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 IGKV5-2P06315 115 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 LINGO3P0C6S8 592 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 SLC5A3P53794 718 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 UBXN2AP68543 259 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 TAF12Q16514 161 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 DNAJC10Q8IXB1 793 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ADCY4Q8NFM4 1077 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 KBTBD8Q8NFY9 601 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 C19orf60Q96EN9 201 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 ANKARQ7Z5J8 1434 aa6.28□□□□□ -1.4
VPS13B-203ENST00000358544 CHD3Q12873 2000 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms