RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 VILLO15195 856 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 KPNA6O60684 536 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SERPINB7O75635 380 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 DCTN3O75935 186 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 PDE5AO76074 875 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SGPL1O95470 568 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ADH1AP07327 375 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 FAM228BP0C875 321 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 TAC1P20366 129 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 FGFR4P22455 802 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 VPS41P49754 854 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 GTF2A2P52657 109 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 NKX3-2P78367 333 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ARHGAP4P98171 946 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ITGA9Q13797 1035 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SURF1Q15526 300 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SLC18A3Q16572 532 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 LONRF1Q17RB8 773 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 TAF1BQ53T94 588 aaPredicted RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 MFSD5Q6N075 450 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 PDXDC1Q6P996 788 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 CCDC174Q6PII3 467 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SLCO4C1Q6ZQN7 724 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 FRMD5Q7Z6J6 570 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SIAH1Q8IUQ4 282 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ZBED8Q8IZ13 594 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 C7orf61Q8IZ16 206 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 RASGEF1CQ8N431 466 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 TTC39CQ8N584 583 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 NSUN6Q8TEA1 469 aaKnown RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 TBCKQ8TEA7 893 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 LARP4BQ92615 738 aaKnown RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 P2RX5Q93086 422 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 FNBP1Q96RU3 617 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ECSITQ9BQ95 431 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 TEX13BQ9BXU2 312 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 TDRD3Q9H7E2 651 aaKnown RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ACAD9Q9H845 621 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 NDUFA13Q9P0J0 144 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 KIAA1522Q9P206 1035 aaPredicted RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 MORF4L1Q9UBU8 362 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ADAMTS1Q9UHI8 967 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SAP30BPQ9UHR5 308 aaKnown RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 RAPGEFL1Q9UHV5 662 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 PCDHA12Q9UN75 941 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 DNM3Q9UQ16 869 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 TRAF3IP3Q9Y228 551 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SNX24Q9Y343 169 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 NR2E1Q9Y466 385 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 AFG3L2Q9Y4W6 797 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 PLXNA1Q9UIW2 1896 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 FRMPD3Q5JV73 1810 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 LCTP09848 1927 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ASB14A6NK59 587 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 TMEM110-MUSTN1A8MSY1 372 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 BTNL10A8MVZ5 291 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 MEIS2O14770 477 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 GSC2O15499 205 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 RIPK2O43353 540 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 KLRC4O43908 158 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ZNF862O60290 1169 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 TLR2O60603 784 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ZC3H11AO75152 810 aaKnown RBP eCLIP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 GH2P01242 217 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 FGGP02679 453 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SERPING1P05155 500 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 P4HBP07237 508 aaKnown RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 PDGFRBP09619 1106 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SPATA31C1P0DKV0 1188 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 COL6A2P12110 1019 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 BRAFP15056 766 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 PTPRAP18433 802 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 CRABP2P29373 138 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 FOXN2P32314 431 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SERPINB8P50452 374 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 POLR2FP61218 127 aaKnown RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 DR1Q01658 176 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 PICALMQ13492 652 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 BCL2A1Q16548 175 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 IL17AQ16552 155 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 PDCD4Q53EL6 469 aaKnown RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 CENPPQ6IPU0 288 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 C1orf228Q6PIY5 440 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ZDHHC24Q6UX98 284 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 RBM44Q6ZP01 1051 aaKnown RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 C3orf62Q6ZUJ4 267 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 PRICKLE2Q7Z3G6 844 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 LRRC57Q8N9N7 239 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 MCPH1Q8NEM0 835 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 REPS2Q8NFH8 660 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 GLG1Q92896 1179 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 ATP6V0A1Q93050 837 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 EIF2AQ9BY44 585 aaKnown RBP4.18□□□□□ -1.74
CNGA1-201ENST00000358519 NFKBIZQ9BYH8 718 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 KRTAP4-5Q9BYR2 181 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 STK33Q9BYT3 514 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 EPB41L1Q9H4G0 881 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 USP29Q9HBJ7 922 aa4.18□□□□□ -1.74
CNGA1-201ENST00000358519 SRRDQ9UH36 339 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms