RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 C16orf86Q6ZW13 317 aa11.9□□□□□ -0.5
CNOT3-202ENST00000358389 SMYD1Q8NB12 490 aa11.9□□□□□ -0.5
CNOT3-202ENST00000358389 FNDC8Q8TC99 324 aa11.9□□□□□ -0.5
CNOT3-202ENST00000358389 PPP4R1Q8TF05 950 aa11.9□□□□□ -0.5
CNOT3-202ENST00000358389 PPCSQ9HAB8 311 aa11.9□□□□□ -0.5
CNOT3-202ENST00000358389 DNAJB4Q9UDY4 337 aa11.9□□□□□ -0.5
CNOT3-202ENST00000358389 DNAJC16Q9Y2G8 782 aa11.9□□□□□ -0.5
CNOT3-202ENST00000358389 LRRIQ4A6NIV6 560 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 MSH4O15457 936 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 PROSCO94903 275 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 TGDSO95455 350 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 GTF2H1P32780 548 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 EIF2B2P49770 351 aaKnown RBP11.89□□□□□ -0.51
CNOT3-202ENST00000358389 VCPP55072 806 aaKnown RBP11.89□□□□□ -0.51
CNOT3-202ENST00000358389 NRF1Q16656 503 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 FNBP1LQ5T0N5 605 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 LMBRD2Q68DH5 695 aaPredicted RBP11.89□□□□□ -0.51
CNOT3-202ENST00000358389 UGT2A3Q6UWM9 527 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 FAM71AQ8IYT1 594 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 MCOLN2Q8IZK6 566 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 NUP93Q8N1F7 819 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 HAUS8Q9BT25 410 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 ARHGEF4Q9NR80 690 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 SPATA7Q9P0W8 599 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 RSL24D1Q9UHA3 163 aaKnown RBP11.89□□□□□ -0.51
CNOT3-202ENST00000358389 RBMX2Q9Y388 322 aaKnown RBP11.89□□□□□ -0.51
CNOT3-202ENST00000358389 A0A088AWK7 358 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 DENND3A2RUS2 1198 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 FAM86B1E9PN63 330 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 DGKIO75912 1065 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 FAM86B2P0C5J1 330 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 OCM2P0CE71 109 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 OCMP0CE72 109 aaPredicted RBP11.89□□□□□ -0.51
CNOT3-202ENST00000358389 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 NR1H2P55055 460 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 MROH9Q5TGP6 573 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 POLNQ7Z5Q5 900 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 NDUFAF2Q8N183 169 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 TTC13Q8NBP0 860 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 JADE3Q92613 823 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 ARMC7Q9H6L4 198 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 SIPA1L3O60292 1781 aaPredicted RBP11.89□□□□□ -0.51
CNOT3-202ENST00000358389 F5H6K3 240 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 MTA2O94776 668 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 KLRC2P26717 231 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 SLC5A2P31639 672 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 STIP1P31948 543 aaKnown RBP11.89□□□□□ -0.51
CNOT3-202ENST00000358389 ELK3P41970 407 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 ESRRGP62508 458 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 SULT2A1Q06520 285 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 METTL25Q8N6Q8 603 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 MMP19Q99542 508 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 ACSS3Q9H6R3 686 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 C1orf112Q9NSG2 853 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 CCPG1Q9ULG6 757 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 POMPQ9Y244 141 aa11.89□□□□□ -0.51
CNOT3-202ENST00000358389 HBS1LQ9Y450 684 aaKnown RBP11.89□□□□□ -0.51
CNOT3-202ENST00000358389 GIPC1O14908 333 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 LYPLA1O75608 230 aaPredicted RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 ZNF24P17028 368 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 CLEC16AQ2KHT3 1053 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 MSS51Q4VC12 460 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 PPP1R18Q6NYC8 613 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 ADGRD1Q6QNK2 874 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 CBWD2Q8IUF1 395 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 CLVS1Q8IUQ0 354 aaPredicted RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 DNAI2Q9GZS0 605 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 UNC45AQ9H3U1 944 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 MRPL47Q9HD33 250 aaKnown RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 CDH22Q9UJ99 828 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 SHOC2Q9UQ13 582 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 TELO2Q9Y4R8 837 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 CLUHO75153 1309 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 CRTAMO95727 393 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 LIG4P49917 911 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 PSMC1P62191 440 aaKnown RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 SMTNL2Q2TAL5 461 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 TMEM53Q6P2H8 277 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 SCYL2Q6P3W7 929 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 PPIL6Q8IXY8 311 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 TAS1R2Q8TE23 839 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 CASP10Q92851 521 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 EME1Q96AY2 570 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 ZNF577Q9BSK1 485 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 PLGRKTQ9HBL7 147 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 STRIP2Q9ULQ0 834 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 PCDHGB4Q9UN71 923 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 GNEQ9Y223 722 aaKnown RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 PCDHGB5Q9Y5G0 923 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 E2F8A0AVK6 867 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 PSMC3P17980 439 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 VARSP26640 1264 aaKnown RBP11.88□□□□□ -0.51
CNOT3-202ENST00000358389 KRT39Q6A163 491 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 ACCSQ96QU6 501 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 CORO1BQ9BR76 489 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 SCINQ9Y6U3 715 aa11.88□□□□□ -0.51
CNOT3-202ENST00000358389 FER1L4A9Z1Z3 1794 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms