RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TNIP2Q8NFZ5 429 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 BBS4Q96RK4 519 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 COLEC11Q9BWP8 271 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 RNF26Q9BY78 433 aaPredicted RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 UNKQ9C0B0 810 aaKnown RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 HAUS4Q9H6D7 363 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 CNOT10Q9H9A5 744 aaKnown RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 CD209Q9NNX6 404 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 VPS28Q9UK41 221 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 EIF3LQ9Y262 564 aaKnown RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 F5H5T6 163 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 HNRNPRO43390 633 aaKnown RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 TPST1O60507 370 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 PEX14O75381 377 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 SLC11A2P49281 568 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 AMPD2Q01433 879 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 CSTF3Q12996 717 aaKnown RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 GRB14Q14449 540 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 POTEGQ6S5H5 508 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 COA1Q9GZY4 146 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 SLITRK2Q9H156 845 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 RRAGCQ9HB90 399 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 MCCC2Q9HCC0 563 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 TLR8Q9NR97 1041 aaKnown RBP10.1□□□□□ -0.79
CHD3-202ENST00000358181 KDM5DQ9BY66 1539 aa10.1□□□□□ -0.79
CHD3-202ENST00000358181 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.09□□□□□ -0.79
CHD3-202ENST00000358181 POTECB2RU33 542 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 PIK3CDO00329 1044 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 USP1O94782 785 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 FGFR4P22455 802 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 SERPINB1P30740 379 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 ACOT2P49753 483 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 HIC1Q14526 733 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 GLRA4Q5JXX5 417 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 RSBN1Q5VWQ0 802 aaPredicted RBP10.09□□□□□ -0.79
CHD3-202ENST00000358181 RBM23Q86U06 439 aaKnown RBP10.09□□□□□ -0.79
CHD3-202ENST00000358181 CYP4Z2PQ8N1L4 340 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 HPS3Q969F9 1004 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 EME1Q96AY2 570 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 RGS18Q9NS28 235 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 MAT2BQ9NZL9 334 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 AGO2Q9UKV8 859 aaKnown RBP10.09□□□□□ -0.79
CHD3-202ENST00000358181 CHD1O14646 1710 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 CPDO75976 1380 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 TBKBP1A7MCY6 615 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 IGKV5-2P06315 115 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 RAG1P15918 1043 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 CLK3P49761 638 aaKnown RBP10.09□□□□□ -0.79
CHD3-202ENST00000358181 STK4Q13043 487 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 GPD1LQ8N335 351 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 SH3BP4Q9P0V3 963 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 RPS6KA6Q9UK32 745 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 C17orf102A2RUQ5 167 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 PRPF3O43395 683 aaKnown RBP10.09□□□□□ -0.79
CHD3-202ENST00000358181 RPS6KA3P51812 740 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 RAD23BP54727 409 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 GPC5P78333 572 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 C9orf131Q5VYM1 1079 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 DET1Q7L5Y6 550 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 GALNTL5Q7Z4T8 443 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 KLHL23Q8NBE8 558 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 OSCP1Q8WVF1 389 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 SLC9A6Q92581 669 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 CNDP1Q96KN2 507 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 NPHS2Q9NP85 383 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 STX7O15400 261 aaKnown RBP10.09□□□□□ -0.79
CHD3-202ENST00000358181 MTA2O94776 668 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 BCAP31P51572 246 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 FCHO2Q0JRZ9 810 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 ALG11Q2TAA5 492 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 AK8Q96MA6 479 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 TMEM47Q9BQJ4 181 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 WDR41Q9HAD4 459 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 ZNF112Q9UJU3 913 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 PSMD9O00233 223 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 ORC1Q13415 861 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 XRCC4Q13426 336 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 WDR72Q3MJ13 1102 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 RABGAP1LQ5R372 815 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 CACHD1Q5VU97 1274 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 SLC30A5Q8TAD4 765 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 MCOLN3Q8TDD5 553 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 UTP15Q8TED0 518 aaKnown RBP10.09□□□□□ -0.79
CHD3-202ENST00000358181 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.09□□□□□ -0.792e-8■□□□□ 10.2
CHD3-202ENST00000358181 DCLK1O15075 740 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 PGM3O95394 542 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 SCARF1Q14162 830 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 C16orf59Q7L2K0 433 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 ULK2Q8IYT8 1036 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 ADGRF4Q8IZF3 695 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 FBXO32Q969P5 355 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 CLEC4MQ9H2X3 399 aaPredicted RBP10.09□□□□□ -0.79
CHD3-202ENST00000358181 VTA1Q9NP79 307 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 NMRK1Q9NWW6 199 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 GULP1Q9UBP9 304 aa10.09□□□□□ -0.79
CHD3-202ENST00000358181 C2orf81A6NN90 581 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 VPS26AO75436 327 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 CDC27P30260 824 aa10.08□□□□□ -0.8
CHD3-202ENST00000358181 CPT1AP50416 773 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms