RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CEP57Q86XR8 500 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 RHOT1Q8IXI2 618 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 CMTR2Q8IYT2 770 aaKnown RBP17.92■□□□□ 0.46
TPM1-205ENST00000357980 RNF168Q8IYW5 571 aaPredicted RBP17.92■□□□□ 0.46
TPM1-205ENST00000357980 BADQ92934 168 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 PRKAG2Q9UGJ0 569 aa17.92■□□□□ 0.46
TPM1-205ENST00000357980 DPYSL4O14531 572 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 TBC1D4O60343 1298 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 LRCH4O75427 683 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 GPD1P21695 349 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 RABGGTBP53611 331 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 RNASE9P60153 205 aaKnown RBP17.91■□□□□ 0.46
TPM1-205ENST00000357980 ACAP1Q15027 740 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 CTXN3Q4LDR2 81 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 RTP2Q5QGT7 225 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 TEX35Q5T0J7 233 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 LRRC38Q5VT99 294 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 ZNF280DQ6N043 979 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 C4orf50Q6ZRC1 276 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 GPRIN1Q7Z2K8 1008 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 RXFP2Q8WXD0 754 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 UBXN4Q92575 508 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 IGSF21Q96ID5 467 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 CNPY3Q9BT09 278 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 VN1R3Q9BXE9 311 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 DMAP1Q9NPF5 467 aaPredicted RBP17.91■□□□□ 0.46
TPM1-205ENST00000357980 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.91■□□□□ 0.46
TPM1-205ENST00000357980 OR6C75A6NL08 312 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 PDGFRAP16234 1089 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 TUBB4BP68371 445 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 FPGSQ05932 587 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 C2orf54Q08AI8 447 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 ELF2Q15723 593 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 SLC39A12Q504Y0 691 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 AADACL2Q6P093 401 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 KCNT2Q6UVM3 1135 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 ZNF365Q70YC5 407 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 TAS1R1Q7RTX1 841 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 KATNAL2Q8IYT4 538 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 DCP1BQ8IZD4 617 aaKnown RBP17.91■□□□□ 0.46
TPM1-205ENST00000357980 TTPALQ9BTX7 342 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 LRRC4Q9HBW1 653 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 PNPLA8Q9NP80 782 aa17.91■□□□□ 0.46
TPM1-205ENST00000357980 RBM12Q9NTZ6 932 aaKnown RBP17.91■□□□□ 0.46
TPM1-205ENST00000357980 COL4A4P53420 1690 aaPredicted RBP17.9■□□□□ 0.46
TPM1-205ENST00000357980 FGGP02679 453 aa17.9■□□□□ 0.46
TPM1-205ENST00000357980 NDUFV1P49821 464 aa17.9■□□□□ 0.46
TPM1-205ENST00000357980 TKTL1P51854 596 aa17.9■□□□□ 0.46
TPM1-205ENST00000357980 EPHB4P54760 987 aa17.9■□□□□ 0.46
TPM1-205ENST00000357980 MRPS5P82675 430 aaKnown RBP17.9■□□□□ 0.46
TPM1-205ENST00000357980 SLC25A11Q02978 314 aaKnown RBP17.9■□□□□ 0.46
TPM1-205ENST00000357980 SPATA2LQ8IUW3 424 aaPredicted RBP17.9■□□□□ 0.46
TPM1-205ENST00000357980 C7orf61Q8IZ16 206 aa17.9■□□□□ 0.46
TPM1-205ENST00000357980 SIX6OS1Q8N1H7 587 aa17.9■□□□□ 0.46
TPM1-205ENST00000357980 MRPL42Q9Y6G3 142 aaKnown RBP17.9■□□□□ 0.46
TPM1-205ENST00000357980 DYNC1I1O14576 645 aa17.89■□□□□ 0.45
TPM1-205ENST00000357980 FBXO21O94952 628 aa17.89■□□□□ 0.45
TPM1-205ENST00000357980 BTG3Q14201 252 aaPredicted RBP17.89■□□□□ 0.45
TPM1-205ENST00000357980 NFE2Q16621 373 aaPredicted RBP17.89■□□□□ 0.45
TPM1-205ENST00000357980 CCDC14Q49A88 953 aa17.89■□□□□ 0.45
TPM1-205ENST00000357980 TXNRD3NBQ6F5E7 133 aa17.89■□□□□ 0.45
TPM1-205ENST00000357980 ANKS3Q6ZW76 656 aa17.89■□□□□ 0.45
TPM1-205ENST00000357980 POLNQ7Z5Q5 900 aa17.89■□□□□ 0.45
TPM1-205ENST00000357980 MMGT1Q8N4V1 131 aa17.89■□□□□ 0.45
TPM1-205ENST00000357980 FUBP3Q96I24 572 aaKnown RBP eCLIP17.89■□□□□ 0.45
TPM1-205ENST00000357980 C11orf84Q9BUA3 381 aaPredicted RBP17.89■□□□□ 0.45
TPM1-205ENST00000357980 CNGB3Q9NQW8 809 aa17.89■□□□□ 0.45
TPM1-205ENST00000357980 HSF2BPO75031 334 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 FGBP02675 491 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 CYP2F1P24903 491 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 PCK1P35558 622 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 SSR1P43307 286 aaKnown RBP17.88■□□□□ 0.45
TPM1-205ENST00000357980 C15orf59Q2T9L4 293 aaPredicted RBP17.88■□□□□ 0.45
TPM1-205ENST00000357980 EFHC1Q5JVL4 640 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 TMEM240Q5SV17 173 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 SH3PXD2AQ5TCZ1 1133 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 SEL1L2Q5TEA6 688 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 RSPO2Q6UXX9 243 aaPredicted RBP17.88■□□□□ 0.45
TPM1-205ENST00000357980 SLC39A11Q8N1S5 342 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 NDRG1Q92597 394 aaKnown RBP17.88■□□□□ 0.45
TPM1-205ENST00000357980 CFAP57Q96MR6 1250 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 ZNF558Q96NG5 402 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 OXCT2Q9BYC2 517 aaPredicted RBP17.88■□□□□ 0.45
TPM1-205ENST00000357980 ULBP1Q9BZM6 244 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 ASNSD1Q9NWL6 643 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 H7C4K7 107 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 LAG3P18627 525 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 IL1R2P27930 398 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 PTPN9P43378 593 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 DAOAP59103 153 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 CLUL1Q15846 466 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 BHLHA9Q7RTU4 235 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 EXD1Q8NHP7 514 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 YME1L1Q96TA2 773 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 NAP1L3Q99457 506 aaPredicted RBP17.88■□□□□ 0.45
TPM1-205ENST00000357980 PLVAPQ9BX97 442 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 CHST7Q9NS84 486 aa17.88■□□□□ 0.45
TPM1-205ENST00000357980 ABI2Q9NYB9 513 aaPredicted RBP17.88■□□□□ 0.45
TPM1-205ENST00000357980 ZBBXA8MT70 800 aa17.87■□□□□ 0.45
TPM1-205ENST00000357980 RNF8O76064 485 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms