RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ST7Q9NRC1 585 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 TAS2R14Q9NYV8 317 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 TJP2Q9UDY2 1190 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 MAGED2Q9UNF1 606 aaPredicted RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 MTCL1Q9Y4B5 1905 aaKnown RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 A0A087X0T9 212 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 SSU72P8A0A1W2PR75 194 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 SLC38A8A6NNN8 435 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 HNRNPA1P09651 372 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 FAM228BP0C875 321 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 FECHP22830 423 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 KIF11P52732 1056 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 VEPH1Q14D04 833 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 SKIV2LQ15477 1246 aaKnown RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 CLEC16AQ2KHT3 1053 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 ASTE1Q2TB18 679 aaPredicted RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 PTPN20Q4JDL3 420 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 RARS2Q5T160 578 aaKnown RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 TRIM72Q6ZMU5 477 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 DNAAF5Q86Y56 855 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 KCTD13Q8WZ19 329 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 HSFY1Q96LI6 401 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 CPXM1Q96SM3 734 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 HCFC1R1Q9NWW0 138 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 CDH22Q9UJ99 828 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 TMCO5BA8MYB1 307 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 E5RJQ4 531 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 PAPLNO95428 1278 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 CSH1P0DML2 217 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 CSH2P0DML3 217 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 LCP1P13796 627 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 RPL34P49207 117 aaKnown RBP15.67■□□□□ 0.1
CCNE1-202ENST00000357943 CENPCQ03188 943 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 GFPT1Q06210 699 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-202ENST00000357943 ADIGQ0VDE8 80 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 C2CD6Q53TS8 623 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 TMEM139Q8IV31 216 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 ELMOD1Q8N336 334 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 CMASQ8NFW8 434 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-202ENST00000357943 STK32AQ8WU08 396 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 PPP1R13BQ96KQ4 1090 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 CEP295NLQ96MC4 621 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 ZNF512Q96ME7 567 aaPredicted RBP15.67■□□□□ 0.1
CCNE1-202ENST00000357943 SLC4A5Q9BY07 1137 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 DEF6Q9H4E7 631 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 DNMT3BQ9UBC3 853 aaKnown RBP15.67■□□□□ 0.1
CCNE1-202ENST00000357943 ASB3Q9Y575 518 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 USP3Q9Y6I4 520 aa15.67■□□□□ 0.1
CCNE1-202ENST00000357943 MYH10P35580 1976 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 SOWAHDA6NJG2 315 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 XYLBO75191 536 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 HOXB8P17481 243 aaPredicted RBP15.66■□□□□ 0.1
CCNE1-202ENST00000357943 TKTL1P51854 596 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 TAF12Q16514 161 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 CYP26C1Q6V0L0 522 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 GRASPQ7Z6J2 395 aaPredicted RBP15.66■□□□□ 0.1
CCNE1-202ENST00000357943 TMEM110Q86TL2 294 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 ITIH5Q86UX2 942 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 VPS36Q86VN1 386 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 TMC8Q8IU68 726 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 HS6ST3Q8IZP7 471 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 SMG7Q92540 1137 aaKnown RBP15.66■□□□□ 0.1
CCNE1-202ENST00000357943 MSLNLQ96KJ4 702 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 CCDC42Q96M95 316 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 NOX5Q96PH1 765 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 BAG1Q99933 345 aaPredicted RBP15.66■□□□□ 0.1
CCNE1-202ENST00000357943 CORO1BQ9BR76 489 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 LRRC4Q9HBW1 653 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 ZNF334Q9HCZ1 680 aaPredicted RBP15.66■□□□□ 0.1
CCNE1-202ENST00000357943 IL37Q9NZH6 218 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 VCANP13611 3396 aa15.66■□□□□ 0.1
CCNE1-202ENST00000357943 H3BQ06 376 aaPredicted RBP15.65■□□□□ 0.1
CCNE1-202ENST00000357943 ERBB2P04626 1255 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 POU2F2P09086 479 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 USP17L7P0C7H9 530 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 MMP8P22894 467 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 NSFP46459 744 aaKnown RBP15.65■□□□□ 0.1
CCNE1-202ENST00000357943 NTHL1P78549 312 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 CLUL1Q15846 466 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 SLC18A3Q16572 532 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 ACAD10Q6JQN1 1059 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 ERICH1Q86X53 443 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 LRRC8AQ8IWT6 810 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 SCUBE3Q8IX30 993 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 CLEC4CQ8WTT0 213 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 NDRG1Q92597 394 aaKnown RBP15.65■□□□□ 0.1
CCNE1-202ENST00000357943 MYRFLQ96LU7 910 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 TTLL2Q9BWV7 592 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 LRRC3Q9BY71 257 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 ULBP1Q9BZM6 244 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 MIS12Q9H081 205 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 S1PR5Q9H228 398 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 PIDD1Q9HB75 910 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 SPTLC3Q9NUV7 552 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 NAGPAQ9UK23 515 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.65■□□□□ 0.1
CCNE1-202ENST00000357943 FAM92AA1XBS5 289 aa15.65■□□□□ 0.1
CCNE1-202ENST00000357943 NRG2O14511 850 aaPredicted RBP15.65■□□□□ 0.1
CCNE1-202ENST00000357943 PAPSS1O43252 624 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms