RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 NOCTQ9UK39 431 aaKnown RBP16.88■□□□□ 0.29
FDPS-201ENST00000356657 USP15Q9Y4E8 981 aaPredicted RBP16.88■□□□□ 0.29
FDPS-201ENST00000356657 DOCK6Q96HP0 2047 aa16.88■□□□□ 0.29
FDPS-201ENST00000356657 NOTCH4Q99466 2003 aa16.88■□□□□ 0.29
FDPS-201ENST00000356657 MYO16Q9Y6X6 1858 aa16.88■□□□□ 0.29
FDPS-201ENST00000356657 GOLGA6L6A8MZA4 724 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 SART1O43290 800 aaKnown RBP16.87■□□□□ 0.29
FDPS-201ENST00000356657 MBTPS2O43462 519 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 SOAT2O75908 522 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 RHOP08100 348 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 HMGA1P17096 107 aaKnown RBP16.87■□□□□ 0.29
FDPS-201ENST00000356657 PFKLP17858 780 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 YWHAQP27348 245 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 CASP14P31944 242 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 GPD2P43304 727 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 RPL34P49207 117 aaKnown RBP16.87■□□□□ 0.29
FDPS-201ENST00000356657 CACNA2D1P54289 1103 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 SMAD2Q15796 467 aaKnown RBP16.87■□□□□ 0.29
FDPS-201ENST00000356657 RAB41Q5JT25 222 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 PIGZQ86VD9 579 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 VPS36Q86VN1 386 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 OR8K1Q8NGG5 319 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 DNAJC7Q99615 494 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 CORO1BQ9BR76 489 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 ZNHIT6Q9NWK9 470 aaKnown RBP16.87■□□□□ 0.29
FDPS-201ENST00000356657 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.87■□□□□ 0.29
FDPS-201ENST00000356657 DNMT3BQ9UBC3 853 aaKnown RBP16.87■□□□□ 0.29
FDPS-201ENST00000356657 USTQ9Y2C2 406 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 OBSL1O75147 1896 aa16.87■□□□□ 0.29
FDPS-201ENST00000356657 HHLA1C9JL84 531 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 DLL1O00548 723 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 BEST1O76090 585 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 FBXO21O94952 628 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 DDX6P26196 483 aaKnown RBP eCLIP16.86■□□□□ 0.29
FDPS-201ENST00000356657 PSEN1P49768 467 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 KIF11P52732 1056 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 TBX2Q13207 712 aaPredicted RBP16.86■□□□□ 0.29
FDPS-201ENST00000356657 PTPN21Q16825 1174 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 CCDC186Q7Z3E2 898 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 IRF2BP2Q7Z5L9 587 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 GRASPQ7Z6J2 395 aaPredicted RBP16.86■□□□□ 0.29
FDPS-201ENST00000356657 NOP9Q86U38 636 aaKnown RBP16.86■□□□□ 0.29
FDPS-201ENST00000356657 TMC8Q8IU68 726 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 GIPC2Q8TF65 315 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 SECISBP2LQ93073 1101 aaKnown RBP16.86■□□□□ 0.29
FDPS-201ENST00000356657 LRRC3Q9BY71 257 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 GRPEL1Q9HAV7 217 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 LRRC4Q9HBW1 653 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 ACP6Q9NPH0 428 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 CNGB3Q9NQW8 809 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 IMPACTQ9P2X3 320 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 USP3Q9Y6I4 520 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 MFAP3LO75121 409 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 ADCY5O95622 1261 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 SERPING1P05155 500 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 GPR15P49685 360 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 MRE11P49959 708 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 ARID5AQ03989 594 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 KLHL30Q0D2K2 578 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 CLUL1Q15846 466 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 PTCRAQ6ISU1 281 aaPredicted RBP16.86■□□□□ 0.29
FDPS-201ENST00000356657 SIX6OS1Q8N1H7 587 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 ARHGAP18Q8N392 663 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 ADAMTS19Q8TE59 1207 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 TRIM62Q9BVG3 475 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 COL25A1Q9BXS0 654 aaPredicted RBP16.86■□□□□ 0.29
FDPS-201ENST00000356657 GDE1Q9NZC3 331 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 PRKAG3Q9UGI9 489 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 SCML2Q9UQR0 700 aa16.86■□□□□ 0.29
FDPS-201ENST00000356657 DOCK8Q8NF50 2099 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 TCF20Q9UGU0 1960 aaKnown RBP16.85■□□□□ 0.29
FDPS-201ENST00000356657 GRXCR2A6NFK2 248 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 AKR1B15C9JRZ8 316 aaPredicted RBP16.85■□□□□ 0.29
FDPS-201ENST00000356657 FSHRP23945 695 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 TUBP50607 506 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 PDCLQ13371 301 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 ARHGAP15Q53QZ3 475 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 PRSS36Q5K4E3 855 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 SNX30Q5VWJ9 437 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 OTOP3Q7RTS5 596 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 TMEM110Q86TL2 294 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 ZDHHC17Q8IUH5 632 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.85■□□□□ 0.29
FDPS-201ENST00000356657 UBA3Q8TBC4 463 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 IPO4Q8TEX9 1081 aaKnown RBP16.85■□□□□ 0.29
FDPS-201ENST00000356657 CPLX3Q8WVH0 158 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 IRGQQ8WZA9 623 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 CDK5RAP1Q96SZ6 601 aaKnown RBP16.85■□□□□ 0.29
FDPS-201ENST00000356657 SLC4A5Q9BY07 1137 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 ABHD10Q9NUJ1 306 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 TRPM5Q9NZQ8 1165 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 MAGED2Q9UNF1 606 aaPredicted RBP16.85■□□□□ 0.29
FDPS-201ENST00000356657 MRPS23Q9Y3D9 190 aaKnown RBP16.85■□□□□ 0.29
FDPS-201ENST00000356657 NR2E1Q9Y466 385 aa16.85■□□□□ 0.29
FDPS-201ENST00000356657 ANAPC1Q9H1A4 1944 aa16.84■□□□□ 0.29
FDPS-201ENST00000356657 VCANP13611 3396 aa16.84■□□□□ 0.29
FDPS-201ENST00000356657 GABRR2P28476 465 aa16.84■□□□□ 0.29
FDPS-201ENST00000356657 CDR1P51861 262 aa16.84■□□□□ 0.29
FDPS-201ENST00000356657 CDK17Q00537 523 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms