RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 C2orf42Q9NWW7 574 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 SERTAD1Q9UHV2 236 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 RCOR1Q9UKL0 485 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 OTOGLQ3ZCN5 2332 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 MED19A0JLT2 244 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-204ENST00000356316 ZNF840PA6NDX5 716 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 LEFTY2O00292 366 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 AKAP3O75969 853 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 RTN3O95197 1032 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-204ENST00000356316 KIF20AO95235 890 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 TCF3P15923 654 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 USP46P62068 366 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 DNM1Q05193 864 aaKnown RBP11.34□□□□□ -0.59
CAPN3-204ENST00000356316 EHHADHQ08426 723 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 TAF10Q12962 218 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 NCOA4Q13772 614 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 SGSM1Q2NKQ1 1148 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 ZNF699Q32M78 642 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 PRR23CQ6ZRP0 262 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 SYT13Q7L8C5 426 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 C12orf50Q8NA57 414 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-204ENST00000356316 B3GALNT2Q8NCR0 500 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 PDZD8Q8NEN9 1154 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 RIN3Q8TB24 985 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 NETO1Q8TDF5 533 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 ACDQ96AP0 544 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 PAGE5Q96GU1 130 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 LOXL4Q96JB6 756 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 TTLL2Q9BWV7 592 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 LINC00597Q9H2U6 94 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 USP25Q9UHP3 1055 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.34□□□□□ -0.59
CAPN3-204ENST00000356316 ATG2BQ96BY7 2078 aa11.34□□□□□ -0.59
CAPN3-204ENST00000356316 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 APBB3O95704 486 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 MYL1P05976 194 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 MBL2P11226 248 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-204ENST00000356316 YWHAQP27348 245 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 CASP4P49662 377 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 SLC7A9P82251 487 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 STK4Q13043 487 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 USP4Q13107 963 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 PKN3Q6P5Z2 889 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 DDX42Q86XP3 938 aaKnown RBP eCLIP11.33□□□□□ -0.6
CAPN3-204ENST00000356316 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 KIAA1958Q8N8K9 716 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 PARD3BQ8TEW8 1205 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 SPATA32Q96LK8 384 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 B3GNT5Q9BYG0 378 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 ZNF518BQ9C0D4 1074 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 DNAI2Q9GZS0 605 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 NACA2Q9H009 215 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 RNF38Q9H0F5 515 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 ARRDC1-AS1Q9H2J1 176 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 DPEP3Q9H4B8 488 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 SMPD4Q9NXE4 827 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 CHORDC1Q9UHD1 332 aaPredicted RBP11.33□□□□□ -0.6
CAPN3-204ENST00000356316 FRMD4BQ9Y2L6 1034 aa11.33□□□□□ -0.6
CAPN3-204ENST00000356316 HELZP42694 1942 aaKnown RBP11.33□□□□□ -0.6
CAPN3-204ENST00000356316 A0A1B0GVL5 298 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 CLDN5O00501 218 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 PDXKO00764 312 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 CALUO43852 315 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-204ENST00000356316 RHOBTB1O94844 696 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 RPN1P04843 607 aaKnown RBP11.32□□□□□ -0.6
CAPN3-204ENST00000356316 CMA1P23946 247 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 CDH8P55286 799 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 DMC1Q14565 340 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 ELF2Q15723 593 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 KMT5BQ4FZB7 885 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-204ENST00000356316 C2orf27AQ580R0 203 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 IL31Q6EBC2 164 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 FILIP1Q7Z7B0 1213 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 KBTBD6Q86V97 674 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 SLC9A9Q8IVB4 645 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 ADGRG2Q8IZP9 1017 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 OVCA2Q8WZ82 227 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
CAPN3-204ENST00000356316 TAF4BQ92750 862 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 FBXO32Q969P5 355 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 SMARCD1Q96GM5 515 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 HHIPQ96QV1 700 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 KCNK16Q96T55 309 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 XYLT2Q9H1B5 865 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 VRTNQ9H8Y1 702 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 CFAP97Q9P2B7 532 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 TBC1D14Q9P2M4 693 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 CPQQ9Y646 472 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 PTPRDP23468 1912 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 LAMA1P25391 3075 aa11.32□□□□□ -0.6
CAPN3-204ENST00000356316 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-204ENST00000356316 SLC30A4O14863 429 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 IKBKBO14920 756 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 ADH1CP00326 375 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 C4BPAP04003 597 aaKnown RBP11.31□□□□□ -0.6
CAPN3-204ENST00000356316 NR3C1P04150 777 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 ZNF806P0C7X5 589 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 PFKFB1P16118 471 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms