RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 LCP1P13796 627 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 IL1R2P27930 398 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 PTPN9P43378 593 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 DRG2P55039 364 aaKnown RBP23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 CASP8Q14790 479 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 TAZQ16635 292 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 PAN2Q504Q3 1202 aaKnown RBP23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 INTS6LQ5JSJ4 861 aaKnown RBP23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 ZFYVE27Q5T4F4 411 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 MFSD7Q6UXD7 560 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 JAMLQ86YT9 394 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 GSPT2Q8IYD1 628 aaKnown RBP23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 CMASQ8NFW8 434 aaPredicted RBP23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 PCED1BQ96HM7 432 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 ZNF333Q96JL9 665 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 FAM193BQ96PV7 902 aaPredicted RBP23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 ERP44Q9BS26 406 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 DCLK3Q9C098 648 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 HIPK3Q9H422 1215 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 USP18Q9UMW8 372 aa23.95■■□□□ 1.43
SCAMP3-202ENST00000355379 HOXA2O43364 376 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 TJP3O95049 919 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 SDC4P31431 198 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 FAAP100Q0VG06 881 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 CCNG2Q16589 344 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 CCDC142Q17RM4 750 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 TFDP3Q5H9I0 405 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 DUPD1Q68J44 220 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 ANKS1BQ7Z6G8 1248 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 IFT81Q8WYA0 676 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 RAPGEF5Q92565 580 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 PKMYT1Q99640 499 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 PLEKHA4Q9H4M7 779 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 ZWILCHQ9H900 591 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 VIPAS39Q9H9C1 493 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 OGFRQ9NZT2 677 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 NFU1Q9UMS0 254 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 TTC3P53804 2025 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 PTPRDP23468 1912 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 hCG_1818297A0A087WSY0 165 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 ESYT3A0FGR9 886 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 C3orf70A6NLC5 250 aaPredicted RBP23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 PI4K2BG5E9Z4 385 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 B4GALT3O60512 393 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 GRAP2O75791 330 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 KDELR1P24390 212 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 CDKN2BP42772 138 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 ATN1P54259 1190 aaPredicted RBP23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 RNASELQ05823 741 aaKnown RBP23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 TAF5Q15542 800 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 MAPRE1Q15691 268 aaKnown RBP23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 OVOS1Q6IE37 1185 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 FBXO46Q6PJ61 603 aaPredicted RBP23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 SYDE1Q6ZW31 735 aaPredicted RBP23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 CTU1Q7Z7A3 348 aaKnown RBP23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 ABI1Q8IZP0 508 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 SMARCD1Q96GM5 515 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 HEMGNQ9BXL5 484 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 LRRC4Q9HBW1 653 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 KRT82Q9NSB4 513 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 KLHL11Q9NVR0 708 aa23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 FEZ2Q9UHY8 353 aaPredicted RBP23.94■■□□□ 1.42
SCAMP3-202ENST00000355379 NLRC5Q86WI3 1866 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 LRRD1A4D1F6 860 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 RRP9O43818 475 aaKnown RBP23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 AP1G2O75843 785 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 BEST1O76090 585 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 ITGB1P05556 798 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 ADCY1Q08828 1119 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 C15orf59Q2T9L4 293 aaPredicted RBP23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 CCDC105Q8IYK2 499 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 CRIPAKQ8N1N5 446 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 HASPINQ8TF76 798 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 GRK7Q8WTQ7 553 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 CASD1Q96PB1 797 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 SMOQ99835 787 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 C11orf84Q9BUA3 381 aaPredicted RBP23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 DDX23Q9BUQ8 820 aaKnown RBP23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 CSNK1G1Q9HCP0 422 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 LRFN2Q9ULH4 789 aa23.93■■□□□ 1.42
SCAMP3-202ENST00000355379 DNAH12Q6ZR08 3092 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 TRAPPC3O43617 180 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 HSF2BPO75031 334 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 FBXO21O94952 628 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 GBP1P32455 592 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 TNNT3P45378 269 aaPredicted RBP23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 MAP3K7CLP57077 242 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 MRPS5P82675 430 aaKnown RBP23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 TLE2Q04725 743 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 ADIGQ0VDE8 80 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 LLGL1Q15334 1064 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 TRIM60Q495X7 471 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 ANKLE1Q8NAG6 615 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 CLEC4CQ8WTT0 213 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 TEKT4Q8WW24 435 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 C1orf54Q8WWF1 131 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 CENPIQ92674 756 aaPredicted RBP23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 MYLPFQ96A32 169 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 CFAP57Q96MR6 1250 aa23.92■■□□□ 1.42
SCAMP3-202ENST00000355379 TRIM51Q9BSJ1 452 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms