RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 URODP06132 367 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 GALNTL6Q49A17 601 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 FAM131BQ86XD5 332 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 THAP11Q96EK4 314 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 ECSITQ9BQ95 431 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 RTFDC1Q9BY42 306 aaPredicted RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 MLNP12872 115 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 GLRBP48167 497 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 MYL6P60660 151 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 FBXW10Q5XX13 1052 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 DENND1BQ6P3S1 775 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 AGO4Q9HCK5 861 aaKnown RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 DDX28Q9NUL7 540 aaKnown RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 ATP11BQ9Y2G3 1177 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 AAR2Q9Y312 384 aaKnown RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 GUCA1CO95843 209 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 HSD17B3P37058 310 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 FNTAP49354 379 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 ERVK-24P63145 666 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 PRKCQQ04759 706 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 LY6KQ17RY6 165 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 PLEKHM3Q6ZWE6 761 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 GBA2Q9HCG7 927 aaPredicted RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 TRPM5Q9NZQ8 1165 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 VPS28Q9UK41 221 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 RASSF10A6NK89 507 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 F8W810 466 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 GCLCP48506 637 aaPredicted RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 BCAT1P54687 386 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 NME5P56597 212 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 OTUD4Q01804 1114 aaKnown RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 BFSP2Q13515 415 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 SLC9A5Q14940 896 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 TRIM60Q495X7 471 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 TXNRD3Q86VQ6 643 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 UNC45BQ8IWX7 931 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 DIS3LQ8TF46 1054 aaKnown RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 TUBGCP3Q96CW5 907 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 RBBP8Q99708 897 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 THUMPD3Q9BV44 507 aaKnown RBP13.68□□□□□ -0.22
SCN8A-202ENST00000355133 SETD4Q9NVD3 440 aa13.68□□□□□ -0.22
SCN8A-202ENST00000355133 CYTH3O43739 400 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 FICDQ9BVA6 458 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 STARD7Q9NQZ5 370 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 TRPC1P48995 793 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 PRIM2P49643 509 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 AASDHQ4L235 1098 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-202ENST00000355133 TFDP3Q5H9I0 405 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 CAPRIN2Q6IMN6 1127 aaKnown RBP13.67□□□□□ -0.22
SCN8A-202ENST00000355133 CNPY4Q8N129 248 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 EPS8L3Q8TE67 593 aaKnown RBP13.67□□□□□ -0.22
SCN8A-202ENST00000355133 UCMAQ8WVF2 138 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 NSL1Q96IY1 281 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 CNDP1Q96KN2 507 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 SEMA6BQ9H3T3 888 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 EIF3LQ9Y262 564 aaKnown RBP13.67□□□□□ -0.22
SCN8A-202ENST00000355133 TMX2Q9Y320 296 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 TIMM13Q9Y5L4 95 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-202ENST00000355133 DUSP10Q9Y6W6 482 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 VPS26AO75436 327 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 NUDT2P50583 147 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 SLC16A1P53985 500 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 PDK2Q15119 407 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 PTPAQ15257 358 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 SLC47A2Q86VL8 602 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 BBS7Q8IWZ6 715 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 EMC1Q8N766 993 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 TAS1R2Q8TE23 839 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 USP13Q92995 863 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-202ENST00000355133 CARD9Q9H257 536 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 CCDC134Q9H6E4 229 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 AP4E1Q9UPM8 1137 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 LZTS1Q9Y250 596 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
SCN8A-202ENST00000355133 CXCL8P10145 99 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 GARTP22102 1010 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 CYP24A1Q07973 514 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 LAMTOR4Q0VGL1 99 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 Q4G0T1 1027 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 SLC44A2Q8IWA5 706 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-202ENST00000355133 C10orf53Q8N6V4 93 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 GMCL1P1Q8NEA9 526 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 ENGASEQ8NFI3 743 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 CYP4F12Q9HCS2 524 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 CEP152O94986 1710 aa13.67□□□□□ -0.22
SCN8A-202ENST00000355133 RHOCP08134 193 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 MAPK7Q13164 816 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 TIGD7Q6NT04 549 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 MIER2Q8N344 545 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 DNAJC7Q99615 494 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 SMAD5Q99717 465 aaKnown RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 ILKAPQ9H0C8 392 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 SYTL2Q9HCH5 934 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 RAD18Q9NS91 495 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 SNTG2Q9NY99 539 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 KIAA1257Q9ULG3 409 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 SDR42E2A6NKP2 422 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 SPTLC1O15269 473 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms