RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 LPCAT4Q643R3 524 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 KLC3Q6P597 504 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 CDR2LQ86X02 465 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 GSDMBQ8TAX9 411 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 KLF6Q99612 283 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 MSTO1Q9BUK6 570 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 SYNCQ9H7C4 482 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 LIN28AQ9H9Z2 209 aaKnown RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 NAALADL1Q9UQQ1 740 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 IVNS1ABPQ9Y6Y0 642 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 COL4A5P29400 1685 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 ZNFX1Q9P2E3 1918 aaKnown RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 SIGLEC16A6NMB1 481 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 BANF1O75531 89 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 PROSCO94903 275 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 VNN1O95497 513 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 HIRAP54198 1017 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 OSTNP61366 133 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 DMPKQ09013 629 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 FSTL1Q12841 308 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 EMC2Q15006 297 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 C1orf146Q5VVC0 180 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 C12orf50Q8NA57 414 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 RAB3IL1Q8TBN0 382 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 FBXL18Q96ME1 805 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 RBM15Q96T37 977 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG6-202ENST00000354901 THTPAQ9BU02 230 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 HAPLN2Q9GZV7 340 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 INIPQ9NRY2 104 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 SAE1Q9UBE0 346 aaPredicted RBP9.79□□□□□ -0.84
SMG6-202ENST00000354901 ANGPTL2Q9UKU9 493 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 NUB1Q9Y5A7 615 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 DOCK5Q9H7D0 1870 aa9.79□□□□□ -0.84
SMG6-202ENST00000354901 ASMTLO95671 621 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 KRT1P04264 644 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 FDX1P10109 184 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 KCNA2P16389 499 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 ATP5DP30049 168 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 HOXD12P35452 270 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 GRIA2P42262 883 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 SKIV2L2P42285 1042 aaKnown RBP9.78□□□□□ -0.84
SMG6-202ENST00000354901 NAA20P61599 178 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 NOP14P78316 857 aaKnown RBP9.78□□□□□ -0.84
SMG6-202ENST00000354901 MAMLD1Q13495 774 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 MED21Q13503 144 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 CUL2Q13617 745 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 FASTKD3Q14CZ7 662 aaKnown RBP9.78□□□□□ -0.84
SMG6-202ENST00000354901 TCEAL1Q15170 157 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 ZACNQ401N2 412 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 FYB2Q5VWT5 728 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 DCUN1D2Q6PH85 259 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 PAOXQ6QHF9 649 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 TREML1Q86YW5 311 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 RHOT1Q8IXI2 618 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 ATP11CQ8NB49 1132 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 MCPH1Q8NEM0 835 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 GRK7Q8WTQ7 553 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 PYDC1Q8WXC3 89 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 MAGEB18Q96M61 343 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 ECSITQ9BQ95 431 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 DEFB129Q9H1M3 183 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 CCDC134Q9H6E4 229 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 VPS37BQ9H9H4 285 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 HEY2Q9UBP5 337 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 DNPEPQ9ULA0 475 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 TTLL13PA6NNM8 815 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 EXTL3O43909 919 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 CIB2O75838 187 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 ENO1P06733 434 aaKnown RBP9.78□□□□□ -0.84
SMG6-202ENST00000354901 VARSP26640 1264 aaKnown RBP9.78□□□□□ -0.84
SMG6-202ENST00000354901 PTK6Q13882 451 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 CYP4A22Q5TCH4 519 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 C6orf163Q5TEZ5 329 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 TXNRD3NBQ6F5E7 133 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 RHBDF2Q6PJF5 856 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 MON1BQ7L1V2 547 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 TTC7BQ86TV6 843 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 RAVER1Q8IY67 606 aaKnown RBP9.78□□□□□ -0.84
SMG6-202ENST00000354901 SAMD3Q8N6K7 520 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 NSUN6Q8TEA1 469 aaKnown RBP9.78□□□□□ -0.84
SMG6-202ENST00000354901 INPP5DQ92835 1189 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 MCEEQ96PE7 176 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 WRNIP1Q96S55 665 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 OXCT2Q9BYC2 517 aaPredicted RBP9.78□□□□□ -0.84
SMG6-202ENST00000354901 APPL1Q9UKG1 709 aa9.78□□□□□ -0.84
SMG6-202ENST00000354901 F8VP50 259 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 TNFSF9P41273 254 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 SNRPFP62306 86 aaKnown RBP9.77□□□□□ -0.84
SMG6-202ENST00000354901 NOMO3P69849 1222 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 TSPY1Q01534 308 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 SP2Q02086 613 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 GPS1Q13098 491 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 SMTNL2Q2TAL5 461 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 MMEL1Q495T6 779 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 SYCP2LQ5T4T6 812 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 IYDQ6PHW0 289 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 MFSD7Q6UXD7 560 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 RAPH1Q70E73 1250 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 CROCCP2Q86T23 111 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms