RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ATP2A2P16615 1042 aaKnown RBP23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 DESP17661 470 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 ADCYAP1R1P41586 468 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 CDH6P55285 790 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 PDK2Q15119 407 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 MTFR1Q15390 333 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 GRIK4Q16099 956 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 CCL15Q16663 113 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 KLHL38Q2WGJ6 581 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 TMEM130Q8N3G9 435 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 KATNBL1Q9H079 304 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 GBA2Q9HCG7 927 aaPredicted RBP23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 RABGEF1Q9UJ41 708 aa23.28■■□□□ 1.32
NKX2-1-201ENST00000354822 TAC1P20366 129 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 GCLCP48506 637 aaPredicted RBP23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 GPX6P59796 221 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 DPYSL3Q14195 570 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 TAF5Q15542 800 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 PKN2Q16513 984 aaKnown RBP23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 FAM183BPQ6ZVS7 135 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 FAM71DQ8N9W8 422 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 HAUS2Q9NVX0 235 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 PRKAG3Q9UGI9 489 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 E5RJQ4 531 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 WDR4P57081 412 aaKnown RBP23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 ROR1Q01973 937 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 PDE4CQ08493 712 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 NOMO1Q15155 1222 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 FNBP1LQ5T0N5 605 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 ANKRD22Q5VYY1 191 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 ICE2Q659A1 982 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 RGS9BPQ6ZS82 235 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 C3orf62Q6ZUJ4 267 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 ANKRD23Q86SG2 305 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 VSIG1Q86XK7 387 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 ANKMY2Q8IV38 441 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 PALM2Q8IXS6 379 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 PITPNM3Q9BZ71 974 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 MORF4L1Q9UBU8 362 aa23.27■■□□□ 1.32
NKX2-1-201ENST00000354822 CFAP73A6NFT4 308 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 DPYSL4O14531 572 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 HOXD8P13378 290 aaPredicted RBP23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 PSMC4P43686 418 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 ADCY1Q08828 1119 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 DARS2Q6PI48 645 aaKnown RBP23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 USP6NLQ92738 828 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 PEBP4Q96S96 227 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 ACSS3Q9H6R3 686 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 C10orf88Q9H8K7 445 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 KLHL14Q9P2G3 628 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 XPO7Q9UIA9 1087 aaKnown RBP23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 CLUHO75153 1309 aa23.26■■□□□ 1.31
NKX2-1-201ENST00000354822 CYP3A5P20815 502 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 RNASELQ05823 741 aaKnown RBP23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 SF3A3Q12874 501 aaKnown RBP eCLIP23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 ACVR2BQ13705 512 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 MARCH8Q5T0T0 291 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 CYB5D1Q6P9G0 228 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 CAPN12Q6ZSI9 719 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 TEKT4Q8WW24 435 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 BRI3BPQ8WY22 251 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 RNF157Q96PX1 679 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 ABCF3Q9NUQ8 709 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 RRN3P2A6NIE6 340 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 SNAI1O95863 264 aaPredicted RBP23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 PFKMP08237 780 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 GBP2P32456 591 aaPredicted RBP23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 GOLGA7BQ2TAP0 167 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 GALNTL6Q49A17 601 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 DUSP28Q4G0W2 176 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 RNF43Q68DV7 783 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 ADGRD1Q6QNK2 874 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 ZDHHC17Q8IUH5 632 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 TBCBQ99426 244 aa23.25■■□□□ 1.31
NKX2-1-201ENST00000354822 SPAG7O75391 227 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 FOXN2P32314 431 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 FKBP1BP68106 108 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 CBLBQ13191 982 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 KRT81Q14533 505 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 PCBP1Q15365 356 aaKnown RBP eCLIP23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 DGKDQ16760 1214 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 CYP4V2Q6ZWL3 525 aaPredicted RBP23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 TMEM110Q86TL2 294 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 FBXO36Q8NEA4 188 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 STK32AQ8WU08 396 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 PAIP2Q9BPZ3 127 aaKnown RBP23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 SLC4A5Q9BY07 1137 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 RXFP1Q9HBX9 757 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 STARD13Q9Y3M8 1113 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 MNAT1P51948 309 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 BASP1P80723 227 aaKnown RBP23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 SLC6A3Q01959 620 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 MSS51Q4VC12 460 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 PKDCCQ504Y2 493 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 LRRC52Q8N7C0 313 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 CCDC63Q8NA47 563 aa23.24■■□□□ 1.31
NKX2-1-201ENST00000354822 DHRS4Q9BTZ2 278 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms