RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SLC39A2Q9NP94 309 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 TRPM5Q9NZQ8 1165 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 EBF1Q9UH73 591 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 CPQQ9Y646 472 aa16.91■□□□□ 0.3
PDGFA-201ENST00000354513 MYO18AQ92614 2054 aaKnown RBP16.9■□□□□ 0.3
PDGFA-201ENST00000354513 NFATC1O95644 943 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 APBB3O95704 486 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 ANXA13P27216 316 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 MPLP40238 635 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 AMPD3Q01432 767 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 TAF10Q12962 218 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 PKP1Q13835 747 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 WDR72Q3MJ13 1102 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
PDGFA-201ENST00000354513 TDRD10Q5VZ19 366 aaKnown RBP16.9■□□□□ 0.3
PDGFA-201ENST00000354513 RESP18Q5W5W9 173 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 TCEAL6Q6IPX3 200 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
PDGFA-201ENST00000354513 B3GALNT2Q8NCR0 500 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 TCEAL3Q969E4 200 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 SNX21Q969T3 373 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 SNX25Q9H3E2 840 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 VRTNQ9H8Y1 702 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 MAGEF1Q9HAY2 307 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 PCDHA7Q9UN72 937 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 ADAMTS9Q9P2N4 1935 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 ZFHX4Q86UP3 3567 aa16.9■□□□□ 0.3
PDGFA-201ENST00000354513 MAP1BP46821 2468 aaKnown RBP16.89■□□□□ 0.29
PDGFA-201ENST00000354513 LRRIQ3A6PVS8 624 aaPredicted RBP16.89■□□□□ 0.29
PDGFA-201ENST00000354513 VNN1O95497 513 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 FAM163BP0C2L3 166 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 SLC6A11P48066 632 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 CDH8P55286 799 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 SEC13P55735 322 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 SNRPFP62306 86 aaKnown RBP16.89■□□□□ 0.29
PDGFA-201ENST00000354513 TNNC1P63316 161 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 PSMD2Q13200 908 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 AASDHQ4L235 1098 aaPredicted RBP16.89■□□□□ 0.29
PDGFA-201ENST00000354513 HS2ST1Q7LGA3 356 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 RASSF3Q86WH2 238 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 HSCBQ8IWL3 235 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 KIAA0895Q8NCT3 520 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 WBP2Q969T9 261 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 ACDQ96AP0 544 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 FNBP1Q96RU3 617 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 ELOVL4Q9GZR5 314 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 SMPD4Q9NXE4 827 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 R3HCC1Q9Y3T6 440 aaKnown RBP16.89■□□□□ 0.29
PDGFA-201ENST00000354513 PCDHGA5Q9Y5G8 931 aa16.89■□□□□ 0.29
PDGFA-201ENST00000354513 EPG5Q9HCE0 2579 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 TNFRSF10BO14763 440 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 FOXD2O60548 495 aaPredicted RBP16.88■□□□□ 0.29
PDGFA-201ENST00000354513 F13A1P00488 732 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 C4BPAP04003 597 aaKnown RBP16.88■□□□□ 0.29
PDGFA-201ENST00000354513 ZSCAN22P10073 491 aaPredicted RBP16.88■□□□□ 0.29
PDGFA-201ENST00000354513 BCKDHBP21953 392 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 AFMP43652 599 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 PDE6CP51160 858 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 CLDN10P78369 228 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 IFRD2Q12894 506 aaPredicted RBP16.88■□□□□ 0.29
PDGFA-201ENST00000354513 DHCR24Q15392 516 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 FAM35AQ86V20 835 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 ADGRG2Q8IZP9 1017 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 PHTF2Q8N3S3 785 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 ZMIZ2Q8NF64 920 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 KCNK16Q96T55 309 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 TPSD1Q9BZJ3 242 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 DMAC2Q9NW81 257 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 CFAP97Q9P2B7 532 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 NXF1Q9UBU9 619 aaKnown RBP16.88■□□□□ 0.29
PDGFA-201ENST00000354513 INVSQ9Y283 1065 aa16.88■□□□□ 0.29
PDGFA-201ENST00000354513 ACACBO00763 2458 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 USP24Q9UPU5 2620 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.87■□□□□ 0.29
PDGFA-201ENST00000354513 PVALEFA0A1B0GWK0 134 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 A8MXQ7 604 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 ACTN4O43707 911 aaKnown RBP16.87■□□□□ 0.29
PDGFA-201ENST00000354513 KRT37O76014 449 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 ATICP31939 592 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 PPP3CCP48454 512 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 PGFP49763 221 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 DLG4P78352 724 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 NR1H3Q13133 447 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 KNOP1Q1ED39 458 aaKnown RBP16.87■□□□□ 0.29
PDGFA-201ENST00000354513 C2orf27AQ580R0 203 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 STPG1Q5TH74 334 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 RHBDF2Q6PJF5 856 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 TMEM92Q6UXU6 159 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 KIAA1958Q8N8K9 716 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 C12orf50Q8NA57 414 aaPredicted RBP16.87■□□□□ 0.29
PDGFA-201ENST00000354513 SCAMP5Q8TAC9 235 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 PARD3BQ8TEW8 1205 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 IL37Q9NZH6 218 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 HMGXB4Q9UGU5 601 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 MMP17Q9ULZ9 603 aa16.87■□□□□ 0.29
PDGFA-201ENST00000354513 FRYQ5TBA9 3013 aa16.86■□□□□ 0.29
PDGFA-201ENST00000354513 CHD8Q9HCK8 2581 aa16.86■□□□□ 0.29
PDGFA-201ENST00000354513 PCDH15Q96QU1 1955 aa16.86■□□□□ 0.29
PDGFA-201ENST00000354513 BCLAF3A2AJT9 711 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms