RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 DNPEPQ9ULA0 475 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 FARP1Q9Y4F1 1045 aaPredicted RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 A0A087WZ62 844 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 CST8O60676 142 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 DAB1O75553 588 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 ARIH2O95376 493 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 GJB6O95452 261 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 ZBED1O96006 694 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 OAS1P00973 400 aaKnown RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 CST3P01034 146 aaPredicted RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 WARSP23381 471 aaKnown RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 ARL4AP40617 200 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 GARSP41250 739 aaKnown RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 TAF6P49848 677 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 LIG3P49916 1009 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 CDK16Q00536 496 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 TRIP13Q15645 432 aaPredicted RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 HSDL1Q3SXM5 330 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 PTPN20Q4JDL3 420 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 CYP4A22Q5TCH4 519 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 ATG16L1Q676U5 607 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 NUGGCQ68CJ6 796 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 EEPD1Q7L9B9 569 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 CATSPER4Q7RTX7 472 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 LRRC34Q8IZ02 419 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 TMEM86AQ8N2M4 240 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 APPL2Q8NEU8 664 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 SOCS4Q8WXH5 440 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 HSPH1Q92598 858 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 FDXACB1Q9BRP7 624 aaPredicted RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 DDX23Q9BUQ8 820 aaKnown RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 ACSS3Q9H6R3 686 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 SMYD3Q9H7B4 428 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 GBA2Q9HCG7 927 aaPredicted RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 STAP1Q9ULZ2 295 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 SCAF8Q9UPN6 1271 aaKnown RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 NAALADL1Q9UQQ1 740 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 ZNFX1Q9P2E3 1918 aaKnown RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 CCL15-CCL14A0A0B4J2E2 113 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 C3orf70A6NLC5 250 aaPredicted RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 C2CD4BA6NLJ0 364 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 H3BRB1 525 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 H7C0C1 242 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 MTSS1O43312 755 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 LRCH4O75427 683 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 FAM155BO75949 473 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 KRT37O76014 449 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 DDNO94850 711 aaPredicted RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 NPTXRO95502 500 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 LMNAP02545 664 aaKnown RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 INHBAP08476 426 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 DNAJB2P25686 324 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 HTR7P34969 479 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 MAGEA6P43360 314 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 SCTRP47872 440 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 ATP5OP48047 213 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 CDH6P55285 790 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 ATP11AP98196 1134 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 DNAJC3Q13217 504 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 CCL15Q16663 113 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 KYNUQ16719 465 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 CCDC142Q17RM4 750 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 C9orf131Q5VYM1 1079 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 ADGRD1Q6QNK2 874 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 STRADAQ7RTN6 431 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 TRABD2AQ86V40 505 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 CCDC63Q8NA47 563 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 CDKL2Q92772 493 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 FAF2Q96CS3 445 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 SLC4A5Q9BY07 1137 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 ELOVL4Q9GZR5 314 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 TUT1Q9H6E5 874 aaKnown RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 AAASQ9NRG9 546 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 MKS1Q9NXB0 559 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 GDAP2Q9NXN4 497 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 TSPAN16Q9UKR8 245 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 ZMYND8Q9ULU4 1186 aaPredicted RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 SLC12A4Q9UP95 1085 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 R3HDM2Q9Y2K5 976 aaKnown RBP3.89□□□□□ -1.79
RNF38-203ENST00000353739 USH1CQ9Y6N9 552 aa3.89□□□□□ -1.79
RNF38-203ENST00000353739 F8VP50 259 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 NCAM2O15394 837 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 HUS1O60921 280 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 KRT38O76015 456 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 ENDOD1O94919 500 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 EDN1P05305 212 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 SKIP12755 728 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 MLNP12872 115 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 KCNE1P15382 129 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 PDGFRAP16234 1089 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 PECAM1P16284 738 aaPredicted RBP3.88□□□□□ -1.79
RNF38-203ENST00000353739 MIPP30301 263 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 GPD2P43304 727 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 SLCO1A2P46721 670 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 RAP1GAPP47736 663 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 RPL34P49207 117 aaKnown RBP3.88□□□□□ -1.79
RNF38-203ENST00000353739 NDST1P52848 882 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 SEC24CP53992 1094 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 WNT7BP56706 349 aa3.88□□□□□ -1.79
RNF38-203ENST00000353739 COG7P83436 770 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms