RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FGF13Q92913 245 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 BICD1Q96G01 975 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 PACSIN1Q9BY11 444 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 C2orf40Q9H1Z8 148 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 ADAMTS10Q9H324 1103 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 ZNF446Q9NWS9 450 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 OGFRQ9NZT2 677 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 GINS2Q9Y248 185 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 URB1O60287 2271 aaKnown RBP8.75□□□□□ -1.01
CD44-205ENST00000352818 DOCK6Q96HP0 2047 aa8.75□□□□□ -1.01
CD44-205ENST00000352818 ATMQ13315 3056 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 COL1A2P08123 1366 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 A0A0B4J269 797 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 SPAARA0A1B0GVQ0 90 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 SMIM35A0A1B0GVV1 85 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 ANKRD62A6NC57 917 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 GOLGA8IPA6NC78 632 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 GOLGA8JA6NMD2 632 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 M0QZ92 97 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 NRG2O14511 850 aaPredicted RBP8.74□□□□□ -1.01
CD44-205ENST00000352818 HOXA2O43364 376 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 RPLP2P05387 115 aaKnown RBP8.74□□□□□ -1.01
CD44-205ENST00000352818 FSHRP23945 695 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 SLC11A1P49279 550 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 MFAP3P55082 362 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 MXD4Q14582 209 aaPredicted RBP8.74□□□□□ -1.01
CD44-205ENST00000352818 PPP2R5DQ14738 602 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 TAS1R1Q7RTX1 841 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 WDR5BQ86VZ2 330 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 SYCE1Q8N0S2 351 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 TPCN2Q8NHX9 752 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 ITFG1Q8TB96 612 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 MDM1Q8TC05 714 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 TMEM143Q96AN5 459 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 SAAL1Q96ER3 474 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 NT5C1BQ96P26 610 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 UBL7Q96S82 380 aaPredicted RBP8.74□□□□□ -1.01
CD44-205ENST00000352818 MMS19Q96T76 1030 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 CGRRF1Q99675 332 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 AGPAT1Q99943 283 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 IER2Q9BTL4 223 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 EMILIN2Q9BXX0 1053 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 PRKD2Q9BZL6 878 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 CCDC113Q9H0I3 377 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 SMARCAD1Q9H4L7 1026 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 NRDE2Q9H7Z3 1164 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 ARFGAP3Q9NP61 516 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 UBE2TQ9NPD8 197 aaPredicted RBP8.74□□□□□ -1.01
CD44-205ENST00000352818 VPS45Q9NRW7 570 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 RAB20Q9NX57 234 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 ERAP1Q9NZ08 941 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 DNAJB4Q9UDY4 337 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 NOCTQ9UK39 431 aaKnown RBP8.74□□□□□ -1.01
CD44-205ENST00000352818 AGO2Q9UKV8 859 aaKnown RBP8.74□□□□□ -1.01
CD44-205ENST00000352818 PCDHGA5Q9Y5G8 931 aa8.74□□□□□ -1.01
CD44-205ENST00000352818 ZFP37Q9Y6Q3 630 aaPredicted RBP8.74□□□□□ -1.01
CD44-205ENST00000352818 PTPRQQ9UMZ3 2332 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 RRN3P2A6NIE6 340 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 LRRIQ4A6NIV6 560 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 PCNX2A6NKB5 2137 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 ZBTB42B2RXF5 422 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 K7ERI5 159 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 PDE2AO00408 941 aaPredicted RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 FOXN3O00409 490 aaPredicted RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 ATXN7O15265 892 aaPredicted RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 ASAP2O43150 1006 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 BUB1O43683 1085 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 HBP1O60381 514 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 SRGAP2O75044 1071 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 PNMA6AP0CW24 399 aaPredicted RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 GZMAP12544 262 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 TNFAIP3P21580 790 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 HOXA6P31267 233 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 PAFAH1B1P43034 410 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 AP3M2P53677 418 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 GALCP54803 685 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 NAP1L1P55209 391 aaKnown RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 POU5F1BQ06416 359 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 ARHGAP44Q17R89 818 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 ZACNQ401N2 412 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 GLE1Q53GS7 698 aaKnown RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 ZNF484Q5JVG2 852 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 DAB2IPQ5VWQ8 1189 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 CCDC70Q6NSX1 233 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 Q6ZS52 159 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 FAM43BQ6ZT52 329 aaPredicted RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 SV2AQ7L0J3 742 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 TRMT1LQ7Z2T5 733 aaKnown RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 GPIHBP1Q8IV16 184 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 GLYCTKQ8IVS8 523 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 ZBTB8OSQ8IWT0 167 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 RHOT2Q8IXI1 618 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 ABI1Q8IZP0 508 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 KRT222Q8N1A0 295 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 NME8Q8N427 588 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 SPEM1Q8N4L4 309 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 NOA1Q8NC60 698 aaKnown RBP8.73□□□□□ -1.01
CD44-205ENST00000352818 RNF169Q8NCN4 708 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 EPS8L1Q8TE68 723 aa8.73□□□□□ -1.01
CD44-205ENST00000352818 SEMA4DQ92854 862 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms