RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PTPN9P43378 593 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 ACADSBP45954 432 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 RGS7P49802 495 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PMS2P54278 862 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 VCPP55072 806 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 EIF3BP55884 814 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 SKOR1P84550 965 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CAV1Q03135 178 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 LMNB2Q03252 620 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 DMTNQ08495 405 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 ITGA7Q13683 1181 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 LPIN1Q14693 890 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PPP1R7Q15435 360 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CCDC14Q49A88 953 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 FAM47CQ5HY64 1035 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 KIAA0319Q5VV43 1072 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 WSCD1Q658N2 575 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CD300LGQ6UXG3 332 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PAQR9Q6ZVX9 377 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PAXIP1Q6ZW49 1069 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 ZNF598Q86UK7 904 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 RELL1Q8IUW5 271 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 FUKQ8N0W3 1084 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 ALLCQ8N6M5 410 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 GOLGA6L1Q8N7Z2 621 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CCDC89Q8N998 374 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 TTC13Q8NBP0 860 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 BBOF1Q8ND07 529 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 SPATA18Q8TC71 538 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CCHCR1Q8TD31 782 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 TEKT4Q8WW24 435 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CENPIQ92674 756 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 SNF8Q96H20 258 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 TNIP3Q96KP6 325 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 ZFP42Q96MM3 310 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 LPIN3Q9BQK8 851 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 TSEN34Q9BSV6 310 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 TMEM109Q9BVC6 243 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 FOXP3Q9BZS1 431 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 DNAI2Q9GZS0 605 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PABPC3Q9H361 631 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 FAM204AQ9H8W3 233 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 AAASQ9NRG9 546 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 MTRF1LQ9UGC7 380 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PADI3Q9ULW8 664 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 USP18Q9UMW8 372 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 COLQQ9Y215 455 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PTPN22Q9Y2R2 807 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 CITO14578 2027 aa7.26□□□□□ -1.25
TRIM55-203ENST00000350034 PDCD11Q14690 1871 aaKnown RBP7.26□□□□□ -1.25
TRIM55-203ENST00000350034 SCN1AP35498 2009 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 GOLGA6CA6NDK9 693 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ARL5CA6NH57 179 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 MOXD2PA6NHM9 499 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 HMGB1P1B2RPK0 211 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 XPO1O14980 1071 aaKnown RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 RNF8O76064 485 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 KRT14P02533 472 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ITGAVP06756 1048 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 THP07101 528 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 GOLGA6DP0CG33 693 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 SKIP12755 728 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 CCDC130P13994 396 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ATF2P15336 505 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 PTPN1P18031 435 aaKnown RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 CD52P31358 61 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 THPOP40225 353 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 AFF1P51825 1210 aaKnown RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ACLYP53396 1101 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 PLCB3Q01970 1234 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ADCY1Q08828 1119 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 CALCOCO2Q13137 446 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 BYSLQ13895 437 aaKnown RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 SLMAPQ14BN4 828 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 PDK2Q15119 407 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 TAF5Q15542 800 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 CCDC142Q17RM4 750 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 RAB6CQ53S08 254 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 BOLA3Q53S33 107 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 CEP85LQ5SZL2 805 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 SH3PXD2AQ5TCZ1 1133 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 AGBL2Q5U5Z8 902 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 KAZNQ674X7 775 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 LHX8Q68G74 356 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 HIBCHQ6NVY1 386 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 TRMT10CQ7L0Y3 403 aaKnown RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 BNIPLQ7Z465 357 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 RNF180Q86T96 592 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 TMEM86AQ8N2M4 240 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 B3GALNT2Q8NCR0 500 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 FAM76AQ8TAV0 307 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 CD99L2Q8TCZ2 262 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 SLC2A14Q8TDB8 520 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 KCTD13Q8WZ19 329 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 LPPQ93052 612 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ZBTB9Q96C00 473 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ACSF2Q96CM8 615 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-203ENST00000350034 FAF2Q96CS3 445 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 ATP6V1G3Q96LB4 118 aa7.25□□□□□ -1.25
TRIM55-203ENST00000350034 SENP8Q96LD8 212 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms