RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CASQ2O14958 399 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-203ENST00000349748 ATF2P15336 505 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 COMTP21964 271 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 RPL10P27635 214 aaKnown RBP11.09□□□□□ -0.63
CAPN3-203ENST00000349748 MAGEA4P43358 317 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 GNA12Q03113 381 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 FASTKD3Q14CZ7 662 aaKnown RBP11.09□□□□□ -0.63
CAPN3-203ENST00000349748 USP41Q3LFD5 358 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 CCDC58Q4VC31 144 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 HPS6Q86YV9 775 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 TTC13Q8NBP0 860 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 SCFD1Q8WVM8 642 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 RPGRQ92834 1020 aaKnown RBP11.09□□□□□ -0.63
CAPN3-203ENST00000349748 PCDH12Q9NPG4 1184 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 MARCOQ9UEW3 520 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-203ENST00000349748 PACSIN3Q9UKS6 424 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 BTAF1O14981 1849 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 RTL9Q8NET4 1388 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 A0A1W2PPW3 197 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 TMCC2O75069 709 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 FARP2O94887 1054 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-203ENST00000349748 KITP10721 976 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 ENPP1P22413 925 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 RPA1P27694 616 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 SLC18A1P54219 525 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 TROAPQ12815 778 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 RALGDSQ12967 914 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 ARHGEF6Q15052 776 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 PLEKHA7Q6IQ23 1121 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 GPR180Q86V85 440 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 SLC15A4Q8N697 577 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 CALML6Q8TD86 181 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 TRPC4APQ8TEL6 797 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 BTBD6Q96KE9 485 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 RABGEF1Q9UJ41 708 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 HDAC9Q9UKV0 1011 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 CTDP1Q9Y5B0 961 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-203ENST00000349748 PCDHGA11Q9Y5H2 935 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
CAPN3-203ENST00000349748 INHBBP09529 407 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 JAK1P23458 1154 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 HOXD10P28358 340 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 ALDH3B2P48448 385 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 CSE1LP55060 971 aaKnown RBP11.08□□□□□ -0.64
CAPN3-203ENST00000349748 SGO2Q562F6 1265 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 DCAF17Q5H9S7 520 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-203ENST00000349748 ZNF34Q8IZ26 560 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 SLC30A5Q8TAD4 765 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 CCDC138Q96M89 665 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 NUF2Q9BZD4 464 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 CAAP1Q9H8G2 361 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 C17orf75Q9HAS0 396 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 SAYSD1Q9NPB0 183 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 XPNPEP1Q9NQW7 623 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.08□□□□□ -0.64
CAPN3-203ENST00000349748 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
CAPN3-203ENST00000349748 RAB26Q9ULW5 256 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 CDK2AP1O14519 115 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 RCAN1P53805 252 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 TUBA1BP68363 451 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 CLUL1Q15846 466 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 GRIK5Q16478 980 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 FGD3Q5JSP0 725 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 RWDD4Q6NW29 188 aaKnown RBP11.08□□□□□ -0.64
CAPN3-203ENST00000349748 TUBA1AQ71U36 451 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 MMAAQ8IVH4 418 aaKnown RBP11.08□□□□□ -0.64
CAPN3-203ENST00000349748 ELMOD1Q8N336 334 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 CPSF7Q8N684 471 aaKnown RBP11.08□□□□□ -0.64
CAPN3-203ENST00000349748 NATD1Q8N6N6 113 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 MIGA1Q8NAN2 632 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 TTC17Q96AE7 1141 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 WRNIP1Q96S55 665 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 HAUS8Q9BT25 410 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 ZNF395Q9H8N7 513 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-203ENST00000349748 VPS37BQ9H9H4 285 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 SOX13Q9UN79 622 aa11.08□□□□□ -0.64
CAPN3-203ENST00000349748 ARIH1Q9Y4X5 557 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-203ENST00000349748 ZSCAN5BA6NJL1 495 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 ICMTO60725 284 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 TPTEP56180 551 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 CACNB1Q02641 598 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PEX6Q13608 980 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 C4orf22Q6V702 233 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PQLC1Q8N2U9 271 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 CLIP4Q8N3C7 705 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PPP1R14CQ8TAE6 165 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 B3GNT4Q9C0J1 378 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 MARCH7Q9H992 704 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PI4KBQ9UBF8 816 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 AGO2Q9UKV8 859 aaKnown RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 POMPQ9Y244 141 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 ERGIC3Q9Y282 383 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 DNAJC16Q9Y2G8 782 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 MYH14Q7Z406 1995 aaKnown RBP11.07□□□□□ -0.64
CAPN3-203ENST00000349748 TIAM2Q8IVF5 1701 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 PVALEFA0A1B0GWK0 134 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 CFAP99D6REC4 459 aa11.07□□□□□ -0.64
CAPN3-203ENST00000349748 MYO1DO94832 1006 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms