RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CA14Q9ULX7 337 aa23.38■■□□□ 1.33
SNX3-202ENST00000349379 CNTN6Q9UQ52 1028 aa23.38■■□□□ 1.33
SNX3-202ENST00000349379 C2orf78A6NCI8 922 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 KCNJ18B7U540 433 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 RNF225M0QZC1 329 aaPredicted RBP23.37■■□□□ 1.33
SNX3-202ENST00000349379 PAEPP09466 180 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 ZDHHC11BP0C7U3 371 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 SLC9A1P19634 815 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 AVPR1AP37288 418 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 KCNJ12Q14500 433 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 VWA3BQ502W6 1294 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 HSP90AA4PQ58FG1 418 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 TCP11X2Q5H9J9 407 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 SNX30Q5VWJ9 437 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 CWF19L1Q69YN2 538 aaKnown RBP23.37■■□□□ 1.33
SNX3-202ENST00000349379 GBP6Q6ZN66 633 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 GPRIN1Q7Z2K8 1008 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 PDZD8Q8NEN9 1154 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 IRF7Q92985 503 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 CRACR2AQ9BSW2 395 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 NDST4Q9H3R1 872 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 KIAA1257Q9ULG3 409 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 CCL26Q9Y258 94 aa23.37■■□□□ 1.33
SNX3-202ENST00000349379 F5P12259 2224 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 TRAV19A0A0A6YYK7 116 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 CHADO15335 359 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 OAS1P00973 400 aaKnown RBP23.36■■□□□ 1.33
SNX3-202ENST00000349379 VDRP11473 427 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 GDI1P31150 447 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 TYRO3Q06418 890 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 IFRD2Q12894 506 aaPredicted RBP23.36■■□□□ 1.33
SNX3-202ENST00000349379 EXOC3L4Q17RC7 722 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 KLHL40Q2TBA0 621 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 SGO2Q562F6 1265 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 CAVIN1Q6NZI2 390 aaKnown RBP23.36■■□□□ 1.33
SNX3-202ENST00000349379 TMEM270Q6UE05 265 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 TTC30AQ86WT1 665 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 ANKRD52Q8NB46 1076 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 RIN3Q8TB24 985 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 BPIFB1Q8TDL5 484 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 FBXO32Q969P5 355 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 BRD9Q9H8M2 597 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 TRPC7Q9HCX4 862 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 TDP1Q9NUW8 608 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 PCDHB4Q9Y5E5 795 aa23.36■■□□□ 1.33
SNX3-202ENST00000349379 DPYSL4O14531 572 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 USP17L7P0C7H9 530 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 PRKCSHP14314 528 aaPredicted RBP23.35■■□□□ 1.33
SNX3-202ENST00000349379 TCF3P15923 654 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 PON1P27169 355 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 STARD6P59095 220 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 MLF2Q15773 248 aaPredicted RBP23.35■■□□□ 1.33
SNX3-202ENST00000349379 SLC44A4Q53GD3 710 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 SMYD5Q6GMV2 418 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 ENOSF1Q7L5Y1 443 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 ARL14EPQ8N8R7 260 aaPredicted RBP23.35■■□□□ 1.33
SNX3-202ENST00000349379 FAM81BQ96LP2 452 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 CYP2S1Q96SQ9 504 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 DDX23Q9BUQ8 820 aaKnown RBP23.35■■□□□ 1.33
SNX3-202ENST00000349379 UBXN6Q9BZV1 441 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 FBXO44Q9H4M3 255 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 SIX2Q9NPC8 291 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 APEX2Q9UBZ4 518 aa23.35■■□□□ 1.33
SNX3-202ENST00000349379 O00370 1275 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 ZNF263O14978 683 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 PDE6CP51160 858 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 KIF11P52732 1056 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 MYL5Q02045 173 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 PRKCQQ04759 706 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 USP4Q13107 963 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 NCAPHQ15003 741 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 PKDCCQ504Y2 493 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 ARHGAP29Q52LW3 1261 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 DPY19L2P1Q6NXN4 242 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 SUGP1Q8IWZ8 645 aaKnown RBP23.34■■□□□ 1.33
SNX3-202ENST00000349379 RBBP8NLQ8NC74 664 aaPredicted RBP23.34■■□□□ 1.33
SNX3-202ENST00000349379 TFAP2BQ92481 460 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 ZSWIM1Q9BR11 485 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 UBE2TQ9NPD8 197 aaPredicted RBP23.34■■□□□ 1.33
SNX3-202ENST00000349379 TSPAN16Q9UKR8 245 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 ARHGAP26Q9UNA1 814 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 SCML2Q9UQR0 700 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 USP3Q9Y6I4 520 aa23.34■■□□□ 1.33
SNX3-202ENST00000349379 SHISA7A6NL88 538 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 CKMP06732 381 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 CD19P15391 556 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 HDCP19113 662 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 TUBP50607 506 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 CLCN5P51795 746 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 BCAT1P54687 386 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 VCPP55072 806 aaKnown RBP23.33■■□□□ 1.33
SNX3-202ENST00000349379 SLC7A9P82251 487 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 APBA1Q02410 837 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 ZNF77Q15935 545 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 GOLGA7BQ2TAP0 167 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 YAF2Q8IY57 180 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 FUCA2Q9BTY2 467 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 RNF38Q9H0F5 515 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 MFSD1Q9H3U5 465 aa23.33■■□□□ 1.33
SNX3-202ENST00000349379 TBC1D17Q9HA65 648 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms