RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 IL9RQ01113 521 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 CAV1Q03135 178 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 CRHR2Q13324 411 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 DCUN1D2Q6PH85 259 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 PPP1R21Q6ZMI0 780 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 SYDE1Q6ZW31 735 aaPredicted RBP22.31■■□□□ 1.16
PTPN18-202ENST00000347849 C12orf29Q8N999 325 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 UBA3Q8TBC4 463 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 FBF1Q8TES7 1133 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 UTP4Q969X6 686 aaKnown RBP22.31■■□□□ 1.16
PTPN18-202ENST00000347849 CCDC77Q9BR77 488 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 ZNF518BQ9C0D4 1074 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 MYLK2Q9H1R3 596 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 IP6K2Q9UHH9 426 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 LGALS13Q9UHV8 139 aa22.31■■□□□ 1.16
PTPN18-202ENST00000347849 SPAG7O75391 227 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 MICAL2O94851 1124 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 ERBB2P04626 1255 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 ATICP31939 592 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 NDST1P52848 882 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 WDR4P57081 412 aaKnown RBP22.3■■□□□ 1.16
PTPN18-202ENST00000347849 KLF1Q13351 362 aaPredicted RBP22.3■■□□□ 1.16
PTPN18-202ENST00000347849 TMED2Q15363 201 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 CYP4F22Q6NT55 531 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 SLC27A1Q6PCB7 646 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 VSIG1Q86XK7 387 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 MICAL1Q8TDZ2 1067 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 GRAMD1AQ96CP6 724 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.3■■□□□ 1.16
PTPN18-202ENST00000347849 NME7Q9Y5B8 376 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 TRIP11Q15643 1979 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 PIK3R2O00459 728 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 PSTPIP1O43586 416 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 KRT10P13645 584 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 YWHAEP62258 255 aaKnown RBP22.3■■□□□ 1.16
PTPN18-202ENST00000347849 RBP5P82980 135 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 EMC1Q8N766 993 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 TRPV1Q8NER1 839 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 HEXIM2Q96MH2 286 aaKnown RBP22.3■■□□□ 1.16
PTPN18-202ENST00000347849 ARHGAP39Q9C0H5 1083 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 RNF39Q9H2S5 420 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 ITGA11Q9UKX5 1188 aa22.3■■□□□ 1.16
PTPN18-202ENST00000347849 TRIP12Q14669 1992 aaPredicted RBP22.3■■□□□ 1.16
PTPN18-202ENST00000347849 TNPO2O14787 897 aaKnown RBP22.29■■□□□ 1.16
PTPN18-202ENST00000347849 IGHA2P01877 340 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 MAN1A1P33908 653 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 SKIV2L2P42285 1042 aaKnown RBP22.29■■□□□ 1.16
PTPN18-202ENST00000347849 DNAJC3Q13217 504 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 ZNF365Q70YC5 407 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 KATNAL2Q8IYT4 538 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 ARFGAP1Q8N6T3 406 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 MAIP1Q8WWC4 291 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 SNX27Q96L92 541 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 RAB3IPQ96QF0 476 aaPredicted RBP22.29■■□□□ 1.16
PTPN18-202ENST00000347849 LHX5Q9H2C1 402 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 KLK14Q9P0G3 267 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 SNX17Q15036 470 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 SPOCK2Q92563 424 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 ERP27Q96DN0 273 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 TMEM237Q96Q45 408 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 LPIN3Q9BQK8 851 aa22.29■■□□□ 1.16
PTPN18-202ENST00000347849 NKX1-2Q9UD57 310 aaPredicted RBP22.29■■□□□ 1.16
PTPN18-202ENST00000347849 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.29■■□□□ 1.16
PTPN18-202ENST00000347849 FAM47DPA6NHR8 397 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 HCRTO43612 131 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 RGS2P41220 211 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 CCDC15Q0P6D6 951 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 STAT4Q14765 748 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 SETDB1Q15047 1291 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 KYAT1Q16773 422 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 MRPL45Q9BRJ2 306 aaKnown RBP22.28■■□□□ 1.16
PTPN18-202ENST00000347849 OSBPL8Q9BZF1 889 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 TXLNGQ9NUQ3 528 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 HAO1Q9UJM8 370 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 CITO14578 2027 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 EIF4E1BA6NMX2 242 aaKnown RBP22.28■■□□□ 1.16
PTPN18-202ENST00000347849 FAM155AB1AL88 458 aaPredicted RBP22.28■■□□□ 1.16
PTPN18-202ENST00000347849 M0QYV0 167 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 RECQL4O94761 1208 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 TARSP26639 723 aaKnown RBP22.28■■□□□ 1.16
PTPN18-202ENST00000347849 PSMC1P62191 440 aaKnown RBP22.28■■□□□ 1.16
PTPN18-202ENST00000347849 RNASELQ05823 741 aaKnown RBP22.28■■□□□ 1.16
PTPN18-202ENST00000347849 DCAF4L1Q3SXM0 396 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 IZUMO3Q5VZ72 239 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 PPP1R2P3Q6NXS1 205 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 FAM167BQ9BTA0 163 aa22.28■■□□□ 1.16
PTPN18-202ENST00000347849 PIN4Q9Y237 131 aaKnown RBP22.28■■□□□ 1.16
PTPN18-202ENST00000347849 SCN1AP35498 2009 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 SLC10A3P09131 477 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 GPD2P43304 727 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 ZBTB6Q15916 424 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 KAZNQ674X7 775 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 NOTUMQ6P988 496 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 MFSD7Q6UXD7 560 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 XYLT1Q86Y38 959 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 APBA2Q99767 749 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 CYP3A43Q9HB55 503 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 SLCO1B3Q9NPD5 702 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 BARX2Q9UMQ3 279 aaPredicted RBP22.27■■□□□ 1.16
PTPN18-202ENST00000347849 PHTF1Q9UMS5 762 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms