RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SPOCD1Q6ZMY3 1216 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 RCOR2Q8IZ40 523 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 GALNT4Q8N4A0 578 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 POMPQ9Y244 141 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 TELO2Q9Y4R8 837 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 TCRBV9S1A1TA0A576 114 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 POLR2MP0CAP2 368 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 VARSP26640 1264 aaKnown RBP15.98■□□□□ 0.15
LMNA-201ENST00000347559 CCR3P51677 355 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 PRELPP51888 382 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 COPAP53621 1224 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 PSMC5P62195 406 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 CYTH1Q15438 398 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 RAB3IL1Q8TBN0 382 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 RSAD2Q8WXG1 361 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 TRIM11Q96F44 468 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 SENP7Q9BQF6 1050 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 CDH22Q9UJ99 828 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 PHLPP1O60346 1717 aa15.98■□□□□ 0.15
LMNA-201ENST00000347559 KBTBD13C9JR72 458 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 FOSP01100 380 aaPredicted RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 SERPINA6P08185 405 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 WEE2P0C1S8 567 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 ATXN3P54252 364 aaPredicted RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 GABPAQ06546 454 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 LPIN1Q14693 890 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 HAUS6Q7Z4H7 955 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 ANKRD23Q86SG2 305 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 AMIGO2Q86SJ2 522 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 DIS3LQ8TF46 1054 aaKnown RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 SETDB2Q96T68 719 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 IFT122Q9HBG6 1241 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 AGTPBP1Q9UPW5 1226 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 AK5Q9Y6K8 562 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 F8VP50 259 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 DNAJA2O60884 412 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 LYPLA1O75608 230 aaPredicted RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 PIM1P11309 404 aaPredicted RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 OASLQ15646 514 aaKnown RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 KCTD21Q4G0X4 260 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 TTC13Q8NBP0 860 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 C7orf26Q96N11 449 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 CSRNP1Q96S65 589 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 SENP6Q9GZR1 1112 aaPredicted RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 Q9H521 79 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 MRPL47Q9HD33 250 aaKnown RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 GPRC5CQ9NQ84 441 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 HBS1LQ9Y450 684 aaKnown RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 AP4B1Q9Y6B7 739 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 SNCAIPQ9Y6H5 919 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 TOP3BO95985 862 aaKnown RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 NCF2P19878 526 aaPredicted RBP15.97■□□□□ 0.15
LMNA-201ENST00000347559 SHMT1P34896 483 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 PEX3P56589 373 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 SLC18A2Q05940 514 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 SNAPC2Q13487 334 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 C6orf52Q5T4I8 152 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 SV2AQ7L0J3 742 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 MON1BQ7L1V2 547 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 RIN3Q8TB24 985 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 C1orf21Q9H246 121 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 CD209Q9NNX6 404 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 TUBGCP4Q9UGJ1 667 aa15.97■□□□□ 0.15
LMNA-201ENST00000347559 ROBO1Q9Y6N7 1651 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 TMEM221A6NGB7 291 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 AVILO75366 819 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 CRTAMO95727 393 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 VIL1P09327 827 aaKnown RBP15.96■□□□□ 0.15
LMNA-201ENST00000347559 RPL22P35268 128 aaKnown RBP15.96■□□□□ 0.15
LMNA-201ENST00000347559 XIAPP98170 497 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 MYBPC2Q14324 1141 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 PDK1Q15118 436 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 ACTL9Q8TC94 416 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 BTBD9Q96Q07 612 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 KIFC3Q9BVG8 833 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 RBM38Q9H0Z9 239 aaKnown RBP15.96■□□□□ 0.15
LMNA-201ENST00000347559 UNC45AQ9H3U1 944 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 PCDH18Q9HCL0 1135 aa15.96■□□□□ 0.15
LMNA-201ENST00000347559 FARP1Q9Y4F1 1045 aaPredicted RBP15.96■□□□□ 0.15
LMNA-201ENST00000347559 A0A1B0GTW7 788 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 TMEM150BA6NC51 233 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 PSMD10O75832 226 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 STT3AP46977 705 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 MYBPC1Q00872 1141 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 OTUD4Q01804 1114 aaKnown RBP15.96■□□□□ 0.14
LMNA-201ENST00000347559 SMTNL2Q2TAL5 461 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 NCCRP1Q6ZVX7 275 aaPredicted RBP15.96■□□□□ 0.14
LMNA-201ENST00000347559 ZFRQ96KR1 1074 aaKnown RBP15.96■□□□□ 0.14
LMNA-201ENST00000347559 STRA6Q9BX79 667 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 MRPS26Q9BYN8 205 aaKnown RBP15.96■□□□□ 0.14
LMNA-201ENST00000347559 C1orf112Q9NSG2 853 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 ZNF180Q9UJW8 692 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 DOLKQ9UPQ8 538 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 DAGLAQ9Y4D2 1042 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 IRS2Q9Y4H2 1338 aa15.96■□□□□ 0.14
LMNA-201ENST00000347559 IGLV3-22A0A075B6J6 115 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 BTBD19C9JJ37 291 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 UFL1O94874 794 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 TNFAIP8O95379 198 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms