RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 UBXN6Q9BZV1 441 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 YIPF3Q9GZM5 350 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 NPHS2Q9NP85 383 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 KIAA1257Q9ULG3 409 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 PJA2O43164 708 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 KRT38O76015 456 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 RTN3O95197 1032 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-202ENST00000346436 NCF2P19878 526 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-202ENST00000346436 NAMPTP43490 491 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 SLC12A3P55017 1021 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 PRKAA1Q13131 559 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 CYB5D1Q6P9G0 228 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 ZNF720Q7Z2F6 126 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 PHACTR4Q8IZ21 702 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 ATP8B4Q8TF62 1192 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 ZNF384Q8TF68 577 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 NLNQ9BYT8 704 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 TLE6Q9H808 572 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 EEF2KO00418 725 aaKnown RBP11.31□□□□□ -0.6
CLCN6-202ENST00000346436 IGF2BP3O00425 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLCN6-202ENST00000346436 COPEO14579 308 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 OPLAHO14841 1288 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 DCTN3O75935 186 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 FBXO21O94952 628 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 CDR2LQ86X02 465 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-202ENST00000346436 CD99L2Q8TCZ2 262 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 TRIM55Q9BYV6 548 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 CYB561D2O14569 222 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 NDUFS3O75489 264 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 FLT3LGP49771 235 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 RAD23BP54727 409 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 PLCL1Q15111 1095 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 TTLL9Q3SXZ7 439 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 RASIP1Q5U651 963 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 RETSATQ6NUM9 610 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 PID1Q7Z2X4 250 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 SLC26A7Q8TE54 656 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.65e-8■■■■□ 20.1
CLCN6-202ENST00000346436 ERP27Q96DN0 273 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 RPRD1AQ96P16 312 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-202ENST00000346436 MCCC1Q96RQ3 725 aaPredicted RBP11.31□□□□□ -0.6
CLCN6-202ENST00000346436 CASS4Q9NQ75 786 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 UVRAGQ9P2Y5 699 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 NEU2Q9Y3R4 380 aa11.31□□□□□ -0.6
CLCN6-202ENST00000346436 LAG3P18627 525 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 SCTRP47872 440 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 OCRLQ01968 901 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 CAV1Q03135 178 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 TGM3Q08188 693 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 HOMEZQ8IX15 550 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 APBB2Q92870 758 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 PPP1R16AQ96I34 528 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 UROC1Q96N76 676 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 MKNK1Q9BUB5 465 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 ARL2BPQ9Y2Y0 163 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 MEI4A8MW99 385 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 SPTLC1O15269 473 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 OGTO15294 1046 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 AP1G2O75843 785 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 C21orf59P57076 290 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 RHBDL3P58872 404 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 ROR1Q01973 937 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 DNAJC3Q13217 504 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 FAM171A1Q5VUB5 890 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 MPZL3Q6UWV2 235 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 RRM2BQ7LG56 351 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 TMC3Q7Z5M5 1100 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 NT5DC3Q86UY8 548 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 GLMNQ92990 594 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
CLCN6-202ENST00000346436 SPACA7Q96KW9 195 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 OSBPL8Q9BZF1 889 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 HIPK3Q9H422 1215 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 SMYD3Q9H7B4 428 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 ASAH2Q9NR71 780 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 SETD4Q9NVD3 440 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 KLK14Q9P0G3 267 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 CRLS1Q9UJA2 301 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 M0QYT0 321 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 HLA-DRAP01903 254 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 GJB1P08034 283 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 ITIH2P19823 946 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 RIOX2Q8IUF8 465 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 CARNMT1Q8N4J0 409 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 RBBP8NLQ8NC74 664 aaPredicted RBP11.3□□□□□ -0.6
CLCN6-202ENST00000346436 KAT5Q92993 513 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 NIF3L1Q9GZT8 377 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 SYNPO2Q9UMS6 1093 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 WEE2P0C1S8 567 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 GRK3P35626 688 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 THOP1P52888 689 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 CDH6P55285 790 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 POLE2P56282 527 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 DLG4P78352 724 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 ORC1Q13415 861 aa11.3□□□□□ -0.6
CLCN6-202ENST00000346436 PCNX4Q63HM2 1172 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms