RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 RAB14P61106 215 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 KCNT1Q5JUK3 1230 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 SLC47A2Q86VL8 602 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 DCPSQ96C86 337 aaKnown RBP18.07■□□□□ 0.48
SPAST-202ENST00000345662 LRMDAQ9H2I8 198 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 SIK3Q9Y2K2 1263 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 MSH4O15457 936 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 SERPINE1P05121 402 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 SLC1A6P48664 564 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 ANO4Q32M45 955 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 WDR59Q6PJI9 974 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 LUZP2Q86TE4 346 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 POU5F2Q8N7G0 328 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 OTUB1Q96FW1 271 aaPredicted RBP18.07■□□□□ 0.48
SPAST-202ENST00000345662 SRPK1Q96SB4 655 aaKnown RBP18.07■□□□□ 0.48
SPAST-202ENST00000345662 NT5C1AQ9BXI3 368 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 NEUROG2Q9H2A3 272 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 MPP6Q9NZW5 540 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 NCKAP1LP55160 1127 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 MMRN1Q13201 1228 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 TBCELQ5QJ74 424 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 AGAP9Q5VTM2 703 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.06■□□□□ 0.48
SPAST-202ENST00000345662 KCNK4Q9NYG8 393 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 STMN3Q9NZ72 180 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 PTPRUQ92729 1446 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 CEMIPQ8WUJ3 1361 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 A0A087WXM4 84 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 ZNF197O14709 1029 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 TNPO2O14787 897 aaKnown RBP18.06■□□□□ 0.48
SPAST-202ENST00000345662 SKIV2L2P42285 1042 aaKnown RBP18.06■□□□□ 0.48
SPAST-202ENST00000345662 FUT11Q495W5 492 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 Q4G0T1 1027 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 BTBD8Q5XKL5 378 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 NET1Q7Z628 596 aaPredicted RBP18.06■□□□□ 0.48
SPAST-202ENST00000345662 MAGED4Q96JG8 741 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 DAGLAQ9Y4D2 1042 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 ZNF263O14978 683 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 CLASP2O75122 1294 aaKnown RBP18.06■□□□□ 0.48
SPAST-202ENST00000345662 WBP4O75554 376 aaKnown RBP18.06■□□□□ 0.48
SPAST-202ENST00000345662 FASP25445 335 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 DMPKQ09013 629 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 RIPK1Q13546 671 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 CLEC16AQ2KHT3 1053 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 EARS2Q5JPH6 523 aaKnown RBP18.06■□□□□ 0.48
SPAST-202ENST00000345662 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 MOXD1Q6UVY6 613 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 PYDC1Q8WXC3 89 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 CTNNAL1Q9UBT7 734 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 ADGRA2Q96PE1 1338 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 ASNA1O43681 348 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 SUPT7LO94864 414 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 GPSM2P81274 684 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 EMC2Q15006 297 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 TWF2Q6IBS0 349 aaKnown RBP18.06■□□□□ 0.48
SPAST-202ENST00000345662 CBWD2Q8IUF1 395 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 MXRA8Q9BRK3 442 aa18.06■□□□□ 0.48
SPAST-202ENST00000345662 NDUFS3O75489 264 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 WFS1O76024 890 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 STAT5BP51692 787 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 NOP9Q86U38 636 aaKnown RBP18.05■□□□□ 0.48
SPAST-202ENST00000345662 ACTL9Q8TC94 416 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 AGBL1Q96MI9 1066 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 ANKEF1Q9NU02 776 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 RUVBL2Q9Y230 463 aaKnown RBP18.05■□□□□ 0.48
SPAST-202ENST00000345662 RCCD1A6NED2 376 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 EVPLLA8MZ36 301 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 LINC00523Q86TU6 105 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 IQCKQ8N0W5 287 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 IPMKQ8NFU5 416 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 SPON2Q9BUD6 331 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 ACAD9Q9H845 621 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 PRR12Q9ULL5 1215 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 CFAP99D6REC4 459 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 SHOX2O60902 331 aaPredicted RBP18.05■□□□□ 0.48
SPAST-202ENST00000345662 ME2P23368 584 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 SSTR1P30872 391 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 NCALDP61601 193 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 DENND5BQ6ZUT9 1274 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 ZNF398Q8TD17 642 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 THUMPD3Q9BV44 507 aaKnown RBP18.05■□□□□ 0.48
SPAST-202ENST00000345662 DNAJC18Q9H819 358 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 RNF103O00237 685 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 CLOCKO15516 846 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 KRT36O76013 467 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 PTPN7P35236 360 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 GTF2H3Q13889 308 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 PDK2Q15119 407 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.05■□□□□ 0.48
SPAST-202ENST00000345662 UBA3Q8TBC4 463 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 CD274Q9NZQ7 290 aa18.05■□□□□ 0.48
SPAST-202ENST00000345662 ELK3P41970 407 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 CCDC142Q17RM4 750 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 ARMCX4Q5H9R4 360 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 ZNF34Q8IZ26 560 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 PROCP04070 461 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 GSNP06396 782 aa18.04■□□□□ 0.48
SPAST-202ENST00000345662 RPA3P35244 121 aaPredicted RBP18.04■□□□□ 0.48
SPAST-202ENST00000345662 RPL5P46777 297 aaKnown RBP18.04■□□□□ 0.48
SPAST-202ENST00000345662 TMEM132DQ14C87 1099 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms