RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 INPPL1O15357 1258 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 TRUB2O95900 331 aaKnown RBP14.25□□□□□ -0.13
CDC42-202ENST00000344548 EPHB4P54760 987 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 PITX1P78337 314 aaPredicted RBP14.25□□□□□ -0.13
CDC42-202ENST00000344548 ADCY1Q08828 1119 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 HLTFQ14527 1009 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDC42-202ENST00000344548 PLEKHG4Q58EX7 1191 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 CCDC105Q8IYK2 499 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 RCOR2Q8IZ40 523 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 C12orf50Q8NA57 414 aaPredicted RBP14.25□□□□□ -0.13
CDC42-202ENST00000344548 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
CDC42-202ENST00000344548 RIN2Q8WYP3 895 aaPredicted RBP14.25□□□□□ -0.13
CDC42-202ENST00000344548 RSPH1Q8WYR4 309 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 SMOQ99835 787 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 CNPY3Q9BT09 278 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 TBC1D13Q9NVG8 400 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 WBP1LQ9NX94 342 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 MTUS1Q9ULD2 1270 aa14.25□□□□□ -0.13
CDC42-202ENST00000344548 AGPSO00116 658 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 TP73O15350 636 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 NPR3P17342 541 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 DSC1Q08554 894 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 ADIGQ0VDE8 80 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 MMRN1Q13201 1228 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 TRIP13Q15645 432 aaPredicted RBP14.24□□□□□ -0.13
CDC42-202ENST00000344548 HSPH1Q92598 858 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 KRT82Q9NSB4 513 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 GPATCH2LQ9NWQ4 482 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 GRHL1Q9NZI5 618 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 M0QZQ0 153 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 XPO1O14980 1071 aaKnown RBP14.24□□□□□ -0.13
CDC42-202ENST00000344548 EOMESO95936 686 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 RPL21P46778 160 aaKnown RBP14.24□□□□□ -0.13
CDC42-202ENST00000344548 LHX1P48742 406 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 HDAC4P56524 1084 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 DHX34Q14147 1143 aaKnown RBP14.24□□□□□ -0.13
CDC42-202ENST00000344548 MAP9Q49MG5 647 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 NOMO2Q5JPE7 1267 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 GLB1LQ6UWU2 654 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 ZDHHC24Q6UX98 284 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 HFE2Q6ZVN8 426 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 FAM35AQ86V20 835 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 COLGALT2Q8IYK4 626 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 TMEM86AQ8N2M4 240 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 GLIS1Q8NBF1 620 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 MED10Q9BTT4 135 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 C11orf84Q9BUA3 381 aaPredicted RBP14.24□□□□□ -0.13
CDC42-202ENST00000344548 BEGAINQ9BUH8 593 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 PLVAPQ9BX97 442 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 PPP1R12CQ9BZL4 782 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 C10orf88Q9H8K7 445 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 NGRNQ9NPE2 291 aaKnown RBP14.24□□□□□ -0.13
CDC42-202ENST00000344548 UBN1Q9NPG3 1134 aa14.24□□□□□ -0.13
CDC42-202ENST00000344548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.24□□□□□ -0.13
CDC42-202ENST00000344548 UTP11Q9Y3A2 253 aaKnown RBP14.24□□□□□ -0.13
CDC42-202ENST00000344548 NRP1O14786 923 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 SKIP12755 728 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 KDELR1P24390 212 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 BCAR1P56945 870 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 DYNLT1P63172 113 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 FAAP100Q0VG06 881 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 CLUL1Q15846 466 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 CA9Q16790 459 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 ZC3H12AQ5D1E8 599 aaKnown RBP14.23□□□□□ -0.13
CDC42-202ENST00000344548 TFDP3Q5H9I0 405 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 EMBQ6PCB8 327 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 POLNQ7Z5Q5 900 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 CMASQ8NFW8 434 aaPredicted RBP14.23□□□□□ -0.13
CDC42-202ENST00000344548 FAM172AQ8WUF8 416 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 CAVIN3Q969G5 261 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 PKMYT1Q99640 499 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 ZDHHC18Q9NUE0 388 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 ASNSD1Q9NWL6 643 aa14.23□□□□□ -0.13
CDC42-202ENST00000344548 PRG3Q9Y2Y8 225 aaPredicted RBP14.23□□□□□ -0.13
CDC42-202ENST00000344548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.22□□□□□ -0.13
CDC42-202ENST00000344548 RNF8O76064 485 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 CYP11A1P05108 521 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 FAM163BP0C2L3 166 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 OR4Q2P0C623 313 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 PLCB3Q01970 1234 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 SCYL2Q6P3W7 929 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 SLC26A9Q7LBE3 791 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 KRT222Q8N1A0 295 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 CRIPAKQ8N1N5 446 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 MYCBPAPQ8TBZ2 947 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 VWCEQ96DN2 955 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 RBM41Q96IZ5 413 aaKnown RBP14.22□□□□□ -0.13
CDC42-202ENST00000344548 HSFY1Q96LI6 401 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 DNPEPQ9ULA0 475 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 NEU2Q9Y3R4 380 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 FAM187AA6NFU0 413 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 HHLA1C9JL84 531 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 AP1G2O75843 785 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 ODC1P11926 461 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 CYP2C18P33260 490 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 PCK1P35558 622 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 PBX3P40426 434 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 OR1G1P47890 313 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 FNTAP49354 379 aa14.22□□□□□ -0.13
CDC42-202ENST00000344548 TRIM60Q495X7 471 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms