RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 AP4B1Q9Y6B7 739 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 MYO3BQ8WXR4 1341 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 MAST2Q6P0Q8 1798 aa8.47□□□□□ -1.05
ATG4A-201ENST00000343524 IQANK1A0A1B0GTG1 560 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 SMCO2A6NFE2 343 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 TMEM114B3SHH9 223 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.46□□□□□ -1.05
ATG4A-201ENST00000343524 ADAMTS3O15072 1205 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 CLDN3O15551 220 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 FAM189A1O60320 539 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 LPXNO60711 386 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 DNAJA2O60884 412 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 OXSR1O95747 527 aaPredicted RBP8.46□□□□□ -1.05
ATG4A-201ENST00000343524 NR3C1P04150 777 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 DHRS4L1P0CG22 281 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 CHRNB2P17787 502 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 RRM1P23921 792 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 TCF7P36402 384 aaPredicted RBP8.46□□□□□ -1.05
ATG4A-201ENST00000343524 CPA2P48052 419 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 DLG4P78352 724 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 LRRC36Q1X8D7 754 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 SNRNP48Q6IEG0 339 aaKnown RBP8.46□□□□□ -1.05
ATG4A-201ENST00000343524 CYP2U1Q7Z449 544 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 GPBP1Q86WP2 473 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 PQLC1Q8N2U9 271 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 LZTR1Q8N653 840 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 BANPQ8N9N5 519 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 TTC13Q8NBP0 860 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 GSTCDQ8NEC7 633 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 TSPAN14Q8NG11 270 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 HM13Q8TCT9 377 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 TCP10LQ8TDR4 215 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 C1orf54Q8WWF1 131 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 NSMCE3Q96MG7 304 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 GCNAQ96QF7 691 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 NUDT12Q9BQG2 462 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 HEPHQ9BQS7 1158 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 MRPL46Q9H2W6 279 aaKnown RBP8.46□□□□□ -1.05
ATG4A-201ENST00000343524 STRIP2Q9ULQ0 834 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 SHOC2Q9UQ13 582 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 DNM3Q9UQ16 869 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 INPP5FQ9Y2H2 1132 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 PPME1Q9Y570 386 aa8.46□□□□□ -1.05
ATG4A-201ENST00000343524 ADAMTSL1Q8N6G6 1762 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 TCRBV7S2A1N4TA0A589 114 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 FAM47E-STBD1D6RA91 191 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 DNALI1O14645 258 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 CRTAMO95727 393 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 FTLP02792 175 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 CYP1A2P05177 515 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 PLA2G4BP0C869 781 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 POLR2MP0CAP2 368 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 COL6A2P12110 1019 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 MYL4P12829 197 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 PSMC2P35998 433 aaKnown RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 IL6STP40189 918 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 ALDH3B2P48448 385 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 ENTPD1P49961 510 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 COPAP53621 1224 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 MYBPC1Q00872 1141 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 KDSRQ06136 332 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 CETN1Q12798 172 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 PTP4A2Q12974 167 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 CCNIQ14094 377 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 KCTD19Q17RG1 926 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 RGS21Q2M5E4 152 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 SBK1Q52WX2 424 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 ARSHQ5FYA8 562 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 C16orf87Q6PH81 154 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 PCGF5Q86SE9 256 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 NLRX1Q86UT6 975 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 ZNF34Q8IZ26 560 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 ZNF420Q8TAQ5 688 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 PSPC1Q8WXF1 523 aaKnown RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 DLG3Q92796 817 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 SERPINI1Q99574 410 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 NEURL2Q9BR09 285 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 RIOK1Q9BRS2 568 aaKnown RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 CCDC106Q9BWC9 280 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 NDEL1Q9GZM8 345 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 GBA3Q9H227 469 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 GREM2Q9H772 168 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 KANSL2Q9H9L4 492 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 CD209Q9NNX6 404 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 TSR3Q9UJK0 312 aaKnown RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 AJAP1Q9UKB5 411 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 AP4S1Q9Y587 144 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 SNX9Q9Y5X1 595 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 DICER1Q9UPY3 1922 aaKnown RBP8.46□□□□□ -1.06
ATG4A-201ENST00000343524 UBE4BO95155 1302 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 MEGF6O75095 1541 aa8.46□□□□□ -1.06
ATG4A-201ENST00000343524 SCN4AP35499 1836 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 LOC102724428A0A0B4J2F2 783 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 H3BSA7 217 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 KPNA4O00629 521 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-201ENST00000343524 PFDN6O15212 129 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 NDUFB5O43674 189 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 ADAM23O75077 832 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 AKAP3O75969 853 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms