RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 PPHLN1Q8NEY8 458 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 LRRC39Q96DD0 335 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 ZBTB18Q99592 522 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 HMG20AQ9NP66 347 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 BCS1LQ9Y276 419 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 MYO5AQ9Y4I1 1855 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SAC3D1A6NKF1 404 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 DCDC2CA8MYV0 355 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CCNB1P14635 433 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 PID1Q7Z2X4 250 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 LINC00523Q86TU6 105 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 FAM71AQ8IYT1 594 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 RYBPQ8N488 228 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SLC20A1Q8WUM9 679 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 GMCL1Q96IK5 515 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CACYBPQ9HB71 228 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 DNAJB4Q9UDY4 337 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CPSF3Q9UKF6 684 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 GAS2O43903 313 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 PHKA2P46019 1235 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TAF2Q6P1X5 1199 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CDR2LQ86X02 465 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 ZNF786Q8N393 782 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 KYQ8NBH2 561 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 RNF225M0QZC1 329 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 M0R3G1 203 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 EPHB6O15197 1021 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CCDC166P0CW27 439 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TSHRP16473 764 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SSTR1P30872 391 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 GPAT2Q6NUI2 795 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CLNKQ7Z7G1 428 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 LDHDQ86WU2 507 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 RBM46Q8TBY0 533 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 ASAP3Q8TDY4 903 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 DNAJC19Q96DA6 116 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 PRPF18Q99633 342 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TUBA8Q9NY65 449 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 PRR12Q9ULL5 1215 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CSADQ9Y600 493 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CFAP99D6REC4 459 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 FCHO1O14526 889 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SYCP2LQ5T4T6 812 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 C6orf89Q6UWU4 347 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 OR6B3Q8NGW1 331 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CALML6Q8TD86 181 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SYBUQ9NX95 663 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 DRG1Q9Y295 367 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 FRMPD4Q14CM0 1322 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 ANKRD36CQ5JPF3 1778 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 UQCRBP14927 111 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 FASP25445 335 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 NAMPTP43490 491 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 NR1H2P55055 460 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SLC12A1Q13621 1099 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 USP10Q14694 798 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 C16orf72Q14CZ0 275 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 PKN2Q16513 984 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 GRTP1Q5TC63 336 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 LRRC55Q6ZSA7 311 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 APTXQ7Z2E3 356 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 PRELID2Q8N945 189 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CNDP1Q96KN2 507 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TCF7L2Q9NQB0 619 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SCN3BQ9NY72 215 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SLC5A4Q9NY91 659 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 DNPEPQ9ULA0 475 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 ATP9BO43861 1147 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SERPINE1P05121 402 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 MLH1P40692 756 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 SESN2P58004 480 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 FUT2Q10981 343 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 RGS21Q2M5E4 152 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CBWD6Q4V339 395 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CBWD3Q5JTY5 395 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CBWD5Q5RIA9 395 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 RC3H1Q5TC82 1133 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 PALB2Q86YC2 1186 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 TDRD5Q8NAT2 981 aaKnown RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 EZH1Q92800 747 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-203ENST00000343508 ECSITQ9BQ95 431 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 NCKIPSDQ9NZQ3 722 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 ARMCX1Q9P291 453 aa4.96□□□□□ -1.62
CSMD3-203ENST00000343508 CYTH3O43739 400 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 RTN3O95197 1032 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-203ENST00000343508 HLA-DRAP01903 254 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 BOLA3Q53S33 107 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 AGAP9Q5VTM2 703 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 SPOCD1Q6ZMY3 1216 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 C4orf50Q6ZRC1 276 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 MED15Q96RN5 788 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 BDH2Q9BUT1 245 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 SNX13Q9Y5W8 968 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 TJP1Q07157 1748 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 MAGEB16A2A368 324 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 TPP2P29144 1249 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-203ENST00000343508 PSMC6P62333 389 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 NME3Q13232 169 aa4.95□□□□□ -1.62
CSMD3-203ENST00000343508 PRMT9Q6P2P2 845 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms