RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 ACLYP53396 1101 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 PSMC1P62191 440 aaKnown RBP15.75■□□□□ 0.11
TPM3-208ENST00000341485 ITGA7Q13683 1181 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 STAT4Q14765 748 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 NT5DC4Q86YG4 428 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 CCT6BQ92526 530 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 APOL6Q9BWW8 343 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 ELOVL4Q9GZR5 314 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 ZWILCHQ9H900 591 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 EURLQ9NYK6 297 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 TPX2Q9ULW0 747 aaKnown RBP15.75■□□□□ 0.11
TPM3-208ENST00000341485 NAALADL1Q9UQQ1 740 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 C2CD2Q9Y426 696 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 PTCH2Q9Y6C5 1203 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 ITGAVP06756 1048 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 SF3A3Q12874 501 aaKnown RBP eCLIP15.74■□□□□ 0.11
TPM3-208ENST00000341485 MPP2Q14168 576 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 CCDC142Q17RM4 750 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 SMTNL2Q2TAL5 461 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 LACTB2Q53H82 288 aaPredicted RBP15.74■□□□□ 0.11
TPM3-208ENST00000341485 FAM228AQ86W67 206 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 XYLT1Q86Y38 959 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 ANKRD42Q8N9B4 389 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 SLC35B2Q8TB61 432 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 GLT1D1Q96MS3 346 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 ELAC2Q9BQ52 826 aaKnown RBP15.74■□□□□ 0.11
TPM3-208ENST00000341485 TMEM121Q9BTD3 319 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 ACTR5Q9H9F9 607 aaPredicted RBP15.74■□□□□ 0.11
TPM3-208ENST00000341485 PLEKHA5Q9HAU0 1116 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 KCNK9Q9NPC2 374 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 TBK1Q9UHD2 729 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 CITO14578 2027 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 MOXD2PA6NHM9 499 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 CDH16O75309 829 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 PECAM1P16284 738 aaPredicted RBP15.74■□□□□ 0.11
TPM3-208ENST00000341485 THPOP40225 353 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 GSCP56915 257 aaPredicted RBP15.74■□□□□ 0.11
TPM3-208ENST00000341485 PTPN11Q06124 597 aaPredicted RBP15.74■□□□□ 0.11
TPM3-208ENST00000341485 RNASEH2BQ5TBB1 312 aaKnown RBP15.74■□□□□ 0.11
TPM3-208ENST00000341485 CEP128Q6ZU80 1094 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 EMC1Q8N766 993 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 FNIP1Q8TF40 1166 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 WNT8BQ93098 351 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 NXF3Q9H4D5 531 aaKnown RBP15.74■□□□□ 0.11
TPM3-208ENST00000341485 METTL5Q9NRN9 209 aaKnown RBP15.74■□□□□ 0.11
TPM3-208ENST00000341485 HES2Q9Y543 173 aa15.74■□□□□ 0.11
TPM3-208ENST00000341485 H0YHG0 523 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 CILPO75339 1184 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 MICAL2O94851 1124 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 BRAFP15056 766 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 ITIH4Q14624 930 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 FASTKD3Q14CZ7 662 aaKnown RBP15.73■□□□□ 0.11
TPM3-208ENST00000341485 MORF4L2Q15014 288 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 KCNT1Q5JUK3 1230 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 TWF2Q6IBS0 349 aaKnown RBP15.73■□□□□ 0.11
TPM3-208ENST00000341485 DYDC1Q8WWB3 177 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 FAXDC2Q96IV6 333 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 SNX27Q96L92 541 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 CCDC77Q9BR77 488 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 KDM4CQ9H3R0 1056 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 PCDH9Q9HC56 1237 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 MLXIPLQ9NP71 852 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 DPP3Q9NY33 737 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 SAMD15Q9P1V8 674 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 SAE1Q9UBE0 346 aaPredicted RBP15.73■□□□□ 0.11
TPM3-208ENST00000341485 ITGA11Q9UKX5 1188 aa15.73■□□□□ 0.11
TPM3-208ENST00000341485 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.73■□□□□ 0.11
TPM3-208ENST00000341485 CCT8L1PA6NM43 557 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 SGK1O00141 431 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 KRT7P08729 469 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 KDELR1P24390 212 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 GCAP28676 217 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 DYNLT1P63172 113 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 ZNF268Q14587 947 aaPredicted RBP15.72■□□□□ 0.11
TPM3-208ENST00000341485 TAZQ16635 292 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 RPAINQ86UA6 219 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 P3H4Q92791 437 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 TMEM176AQ96HP8 235 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 CFAP57Q96MR6 1250 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 TSEN34Q9BSV6 310 aaKnown RBP15.72■□□□□ 0.11
TPM3-208ENST00000341485 SENP6Q9GZR1 1112 aaPredicted RBP15.72■□□□□ 0.11
TPM3-208ENST00000341485 NSRP1Q9H0G5 558 aaKnown RBP15.72■□□□□ 0.11
TPM3-208ENST00000341485 WDR35Q9P2L0 1181 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 AGAP1Q9UPQ3 857 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 EFR3BQ9Y2G0 817 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 DERAQ9Y315 318 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 RALGAPA2Q2PPJ7 1873 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 TCP11X1B4DZS4 312 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 RECQL4O94761 1208 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 IFNB1P01574 187 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 CHRNA1P02708 482 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 GHRP10912 638 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 AKAP5P24588 427 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 ATICP31939 592 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 OTUD4Q01804 1114 aaKnown RBP15.72■□□□□ 0.11
TPM3-208ENST00000341485 PLCB3Q01970 1234 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 PDE4CQ08493 712 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 HADHQ16836 314 aaKnown RBP15.72■□□□□ 0.11
TPM3-208ENST00000341485 HP1BP3Q5SSJ5 553 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms