RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 KRT37O76014 449 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 MOCS2O96007 188 aaPredicted RBP12.45□□□□□ -0.42
USP1-201ENST00000339950 SRGAP2BP0DMP2 458 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 KCNA2P16389 499 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 ARMC3Q5W041 872 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 JADE1Q6IE81 842 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 TAS1R3Q7RTX0 852 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 GBP7Q8N8V2 638 aaPredicted RBP12.45□□□□□ -0.42
USP1-201ENST00000339950 TWNKQ96RR1 684 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 MMP19Q99542 508 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 TMEM120AQ9BXJ8 343 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 SCOCQ9UIL1 159 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 NUDT5Q9UKK9 219 aa12.45□□□□□ -0.42
USP1-201ENST00000339950 C4BPAP04003 597 aaKnown RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 P4HA1P13674 534 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 YWHAEP62258 255 aaKnown RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 SEPT6Q14141 434 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 KIAA0319LQ8IZA0 1049 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 GSDMBQ8TAX9 411 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 MOCOSQ96EN8 888 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 RXFP1Q9HBX9 757 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 COMMD10Q9Y6G5 202 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 PDE5AO76074 875 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 UNGP13051 313 aaPredicted RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 AMPD1P23109 780 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 GRIA1P42261 906 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 XRCC4Q13426 336 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 PIGHQ14442 188 aaPredicted RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 LRRC23Q53EV4 343 aaPredicted RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 ANKRD20A2Q5SQ80 823 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 ANKRD20A1Q5TYW2 823 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 FAM228AQ86W67 206 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 PPIL6Q8IXY8 311 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 PIP4K2CQ8TBX8 421 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 PIWIL1Q96J94 861 aaKnown RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 MFSD14AQ96MC6 490 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 MPHOSPH6Q99547 160 aaKnown RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 TSPAN16Q9UKR8 245 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 ZMYND8Q9ULU4 1186 aaPredicted RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 A0A1B0GUL6 1792 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 IRF6O14896 467 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 ADCY3O60266 1144 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 DNAJC8O75937 253 aaPredicted RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 EDN1P05305 212 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 INSRRP14616 1297 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 TYK2P29597 1187 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 AQP5P55064 265 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 CENPCQ03188 943 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 PTPN11Q06124 597 aaPredicted RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 OLIG2Q13516 323 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 RFWD3Q6PCD5 774 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 TRIM72Q6ZMU5 477 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 C3orf20Q8ND61 904 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 HASPINQ8TF76 798 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 PRR11Q96HE9 360 aaPredicted RBP12.44□□□□□ -0.42
USP1-201ENST00000339950 HAPLN2Q9GZV7 340 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 KLC2Q9H0B6 622 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 GOLGA2P5Q9HBQ8 144 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 MAN1C1Q9NR34 630 aa12.44□□□□□ -0.42
USP1-201ENST00000339950 PSTPIP1O43586 416 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 LYPLA1O75608 230 aaPredicted RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 KRT36O76013 467 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 RGS20O76081 388 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 AVPR1AP37288 418 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 NAMPTP43490 491 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 NR1H3Q13133 447 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 KPNB1Q14974 876 aaKnown RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 THEMIS2Q5TEJ8 643 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 HEATR6Q6AI08 1181 aaKnown RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 SLC30A9Q6PML9 568 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 MON1BQ7L1V2 547 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 PRPF39Q86UA1 669 aaKnown RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 AFG1LQ8WV93 481 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 DDX1Q92499 740 aaKnown RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 TSNARE1Q96NA8 513 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 ZCWPW1Q9H0M4 648 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 SNX25Q9H3E2 840 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 LRRC4Q9HBW1 653 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 AK5Q9Y6K8 562 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 STK10O94804 968 aaKnown RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 MICAL2O94851 1124 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 MLH1P40692 756 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 MMP14P50281 582 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 CCDC142Q17RM4 750 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 CTU1Q7Z7A3 348 aaKnown RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 TRABD2AQ86V40 505 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 CRLF3Q8IUI8 442 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 PORCNQ9H237 461 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 ATXN3LQ9H3M9 355 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 DYNC1LI2O43237 492 aaPredicted RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 LRCH4O75427 683 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 TMEM63AO94886 807 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 GHRP10912 638 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 ARL4AP40617 200 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 DRG2P55039 364 aaKnown RBP12.43□□□□□ -0.42
USP1-201ENST00000339950 TMEM132DQ14C87 1099 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 TTC25Q96NG3 672 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 OSMRQ99650 979 aa12.43□□□□□ -0.42
USP1-201ENST00000339950 SH3GL3Q99963 347 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms