RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 DCDC2Q9UHG0 476 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 USP18Q9UMW8 372 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 TCRBV5S4A2TA0A5A2 114 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 ALBP02768 609 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 ZCCHC18P0CG32 403 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 SERPINB5P36952 375 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 ST8SIA6P61647 398 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 PLIN5Q00G26 463 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 WLSQ5T9L3 541 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 STYK1Q6J9G0 422 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 FAM117BQ6P1L5 589 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 PKN3Q6P5Z2 889 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 ANKRD13AQ8IZ07 590 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 RAET1EQ8TD07 263 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 FAM162AQ96A26 154 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 PARK7Q99497 189 aaKnown RBP12.93□□□□□ -0.34
OTOF-203ENST00000339598 SLC24A2Q9UI40 661 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 HACL1Q9UJ83 578 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 DNAJC16Q9Y2G8 782 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 CCL15-CCL14A0A0B4J2E2 113 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 SOAT2O75908 522 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 RARRES1P49788 294 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 IRX1P78414 480 aaPredicted RBP12.93□□□□□ -0.34
OTOF-203ENST00000339598 PTPN11Q06124 597 aaPredicted RBP12.93□□□□□ -0.34
OTOF-203ENST00000339598 TBX2Q13207 712 aaPredicted RBP12.93□□□□□ -0.34
OTOF-203ENST00000339598 CCL15Q16663 113 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 MRNIPQ6NTE8 343 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
OTOF-203ENST00000339598 L3MBTL3Q96JM7 780 aaPredicted RBP12.93□□□□□ -0.34
OTOF-203ENST00000339598 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.93□□□□□ -0.34
OTOF-203ENST00000339598 O00370 1275 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 JCHAINP01591 159 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 CSE1LP55060 971 aaKnown RBP12.92□□□□□ -0.34
OTOF-203ENST00000339598 BMPR2Q13873 1038 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 CYLC2Q14093 348 aaPredicted RBP12.92□□□□□ -0.34
OTOF-203ENST00000339598 Q4G0T1 1027 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 HS6ST3Q8IZP7 471 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 VPS37AQ8NEZ2 397 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 JCADQ9P266 1359 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 F9P00740 461 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 FAM153BP0C7A2 387 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 HARS2P49590 506 aaKnown RBP12.92□□□□□ -0.34
OTOF-203ENST00000339598 SOX10P56693 466 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 FAM153CQ494X1 144 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 ZCWPW2Q504Y3 356 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 TTC33Q6PID6 262 aaPredicted RBP12.92□□□□□ -0.34
OTOF-203ENST00000339598 SCUBE1Q8IWY4 988 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 KIAA2013Q8IYS2 634 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 ABRAQ8N0Z2 381 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 RAB42Q8N4Z0 105 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 SYTL5Q8TDW5 730 aaPredicted RBP12.92□□□□□ -0.34
OTOF-203ENST00000339598 CYP4F12Q9HCS2 524 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 FAM153AQ9UHL3 310 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 STK25O00506 426 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 DDX3XO00571 662 aaKnown RBP eCLIP12.92□□□□□ -0.34
OTOF-203ENST00000339598 IRF1P10914 325 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 RALBP11234 206 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 S100A5P33763 92 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 UBE3AQ05086 875 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 RASA2Q15283 850 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 PCNX4Q63HM2 1172 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 SLFN11Q7Z7L1 901 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 DDX53Q86TM3 631 aaKnown RBP12.92□□□□□ -0.34
OTOF-203ENST00000339598 STKLD1Q8NE28 680 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 ZNF606Q8WXB4 792 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 BHMTQ93088 406 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 C17orf80Q9BSJ5 609 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 PCDHB8Q9UN66 801 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 CSDE1O75534 798 aaKnown RBP12.92□□□□□ -0.34
OTOF-203ENST00000339598 STAG3L1P0CL83 205 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 PYGMP11217 842 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 DPEP1P16444 411 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 AVPR1AP37288 418 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 PPP3CCP48454 512 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 GEMP55040 296 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 GTF2H3Q13889 308 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 MAPRE1Q15691 268 aaKnown RBP12.92□□□□□ -0.34
OTOF-203ENST00000339598 OLFML2BQ68BL8 750 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 RBBP8Q99708 897 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 LRRC4BQ9NT99 713 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 SOX13Q9UN79 622 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 AP4E1Q9UPM8 1137 aa12.92□□□□□ -0.34
OTOF-203ENST00000339598 HNRNPRO43390 633 aaKnown RBP12.91□□□□□ -0.34
OTOF-203ENST00000339598 PGK2P07205 417 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 BACE1P56817 501 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 SNX17Q15036 470 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 SNX31Q8N9S9 440 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 FAM136AQ96C01 138 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 EHD4Q9H223 541 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 CRLS1Q9UJA2 301 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 MAGEA13PA6NCF6 341 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 SASH3O75995 380 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 LSM8O95777 96 aaKnown RBP12.91□□□□□ -0.34
OTOF-203ENST00000339598 VCAM1P19320 739 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 BGNP21810 368 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 RPS12P25398 132 aaKnown RBP12.91□□□□□ -0.34
OTOF-203ENST00000339598 YY1P25490 414 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 BLVRAP53004 296 aa12.91□□□□□ -0.34
OTOF-203ENST00000339598 KPNB1Q14974 876 aaKnown RBP12.91□□□□□ -0.34
OTOF-203ENST00000339598 KBTBD12Q3ZCT8 623 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms