RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TPSD1Q9BZJ3 242 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 INVSQ9Y283 1065 aa16.68■□□□□ 0.26
LINC01116-202ENST00000339037 LNP1A1A4G5 178 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 ZNF840PA6NDX5 716 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 F8VP50 259 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 K7EQS6 105 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 LEFTY2O00292 366 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 OPRD1P41143 372 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 NOP14P78316 857 aaKnown RBP16.67■□□□□ 0.26
LINC01116-202ENST00000339037 SLC7A9P82251 487 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 SLC39A14Q15043 492 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 PMS2CLQ68D20 193 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 FILIP1Q7Z7B0 1213 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 RASSF3Q86WH2 238 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 KIAA1958Q8N8K9 716 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 GLIS3Q8NEA6 775 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 HPS3Q969F9 1004 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 CNOT6LQ96LI5 555 aaKnown RBP16.67■□□□□ 0.26
LINC01116-202ENST00000339037 TTLL2Q9BWV7 592 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 SNX25Q9H3E2 840 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 KIAA1586Q9HCI6 787 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 HSPBP1Q9NZL4 362 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 MORC2Q9Y6X9 1032 aaPredicted RBP16.67■□□□□ 0.26
LINC01116-202ENST00000339037 FAM208BQ5VWN6 2430 aa16.67■□□□□ 0.26
LINC01116-202ENST00000339037 ANAPC1Q9H1A4 1944 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 C4orf47A7E2U8 309 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 CYP17A1P05093 508 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 DLATP10515 647 aaKnown RBP16.66■□□□□ 0.26
LINC01116-202ENST00000339037 PPP3CCP48454 512 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 NOVA1P51513 510 aaKnown RBP16.66■□□□□ 0.26
LINC01116-202ENST00000339037 SNRNP35Q16560 246 aaKnown RBP16.66■□□□□ 0.26
LINC01116-202ENST00000339037 GAB4Q2WGN9 574 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 MDH1BQ5I0G3 518 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 DAB2IPQ5VWQ8 1189 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 SMYD5Q6GMV2 418 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 HS2ST1Q7LGA3 356 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 MDGA1Q8NFP4 955 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 TNMDQ9H2S6 317 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 SMPD4Q9NXE4 827 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 MMP17Q9ULZ9 603 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 CPQQ9Y646 472 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 FREM2Q5SZK8 3169 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 ABCA7Q8IZY2 2146 aa16.66■□□□□ 0.26
LINC01116-202ENST00000339037 AKAP13Q12802 2813 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 ZFYVE26Q68DK2 2539 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 SLC9A3R1O14745 358 aaPredicted RBP16.65■□□□□ 0.26
LINC01116-202ENST00000339037 KHNYNO15037 678 aaKnown RBP16.65■□□□□ 0.26
LINC01116-202ENST00000339037 STX6O43752 255 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 OLFM2O95897 454 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 ABL1P00519 1130 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 HOXD13P35453 343 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 GNL1P36915 607 aaPredicted RBP16.65■□□□□ 0.26
LINC01116-202ENST00000339037 CRY1Q16526 586 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 CYP2U1Q7Z449 544 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 CCDC33Q8N5R6 958 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 C8orf48Q96LL4 319 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 SLITRK1Q96PX8 696 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 FNBP1Q96RU3 617 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 MRPL45Q9BRJ2 306 aaKnown RBP16.65■□□□□ 0.26
LINC01116-202ENST00000339037 LRRC27Q9C0I9 530 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 ELOVL4Q9GZR5 314 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 RNF38Q9H0F5 515 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 MYO16Q9Y6X6 1858 aa16.65■□□□□ 0.26
LINC01116-202ENST00000339037 HELZP42694 1942 aaKnown RBP16.64■□□□□ 0.26
LINC01116-202ENST00000339037 DMXL2Q8TDJ6 3036 aa16.64■□□□□ 0.26
LINC01116-202ENST00000339037 KIAA1549LQ6ZVL6 1849 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 ANTXRLA6NF34 631 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 SCAMP3O14828 347 aaKnown RBP16.64■□□□□ 0.25
LINC01116-202ENST00000339037 EIF3DO15371 548 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC01116-202ENST00000339037 TACC1O75410 805 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 ALDH1A2O94788 518 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 ADH1CP00326 375 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 OAS1P00973 400 aaKnown RBP16.64■□□□□ 0.25
LINC01116-202ENST00000339037 TNNI1P19237 187 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 BCKDHBP21953 392 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 TNNC1P63316 161 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 MRPS21P82921 87 aaKnown RBP16.64■□□□□ 0.25
LINC01116-202ENST00000339037 TAF10Q12962 218 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 DHCR24Q15392 516 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 WDR72Q3MJ13 1102 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 TDRD10Q5VZ19 366 aaKnown RBP16.64■□□□□ 0.25
LINC01116-202ENST00000339037 TTC30AQ86WT1 665 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 ADGRG2Q8IZP9 1017 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 RDH13Q8NBN7 331 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 OR6B3Q8NGW1 331 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 TRIM9Q9C026 710 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 AGPAT3Q9NRZ7 376 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 KBTBD4Q9NVX7 518 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 CFAP97Q9P2B7 532 aa16.64■□□□□ 0.25
LINC01116-202ENST00000339037 DSPP15924 2871 aaKnown RBP16.64■□□□□ 0.25
LINC01116-202ENST00000339037 CST3P01034 146 aaPredicted RBP16.63■□□□□ 0.25
LINC01116-202ENST00000339037 PTPN1P18031 435 aaKnown RBP16.63■□□□□ 0.25
LINC01116-202ENST00000339037 EIF2DP41214 584 aaKnown RBP16.63■□□□□ 0.25
LINC01116-202ENST00000339037 DHPSP49366 369 aaPredicted RBP16.63■□□□□ 0.25
LINC01116-202ENST00000339037 CACNA2D1P54289 1103 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 ASIC1P78348 528 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 IFRD2Q12894 506 aaPredicted RBP16.63■□□□□ 0.25
LINC01116-202ENST00000339037 DDX42Q86XP3 938 aaKnown RBP eCLIP16.63■□□□□ 0.25
LINC01116-202ENST00000339037 SFTPA1Q8IWL2 248 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms