RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ERI2A8K979 691 aaKnown RBP12.17□□□□□ -0.46
SHANK2-201ENST00000338508 KCNQ2O43526 872 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 MAGEA4P43358 317 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 ANXA11P50995 505 aaKnown RBP12.17□□□□□ -0.46
SHANK2-201ENST00000338508 CCNG1P51959 295 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 CYP4Z1Q86W10 505 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 ZNF473Q8WTR7 871 aaKnown RBP12.17□□□□□ -0.46
SHANK2-201ENST00000338508 SERHL2Q9H4I8 314 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 SERHLQ9NQF3 203 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 PLA2G6O60733 806 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 HOXA7P31268 230 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-201ENST00000338508 ACADSBP45954 432 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 HLA-DQA1Q5Y7H0 255 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 DENND1BQ6P3S1 775 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 CYP4X1Q8N118 509 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 RDM1Q8NG50 284 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 RRN3P2A6NIE6 340 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 IFRD1O00458 451 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-201ENST00000338508 SNRPAP09012 282 aaKnown RBP12.17□□□□□ -0.46
SHANK2-201ENST00000338508 FCGRTP55899 365 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 EPHA10Q5JZY3 1008 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 AGAP9Q5VTM2 703 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 ACOT1Q86TX2 421 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 DNAJC1Q96KC8 554 aaKnown RBP12.17□□□□□ -0.46
SHANK2-201ENST00000338508 SAMD9Q5K651 1589 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 MOXD2PA6NHM9 499 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 GRK4P32298 578 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 C12orf60Q5U649 245 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 STK33Q9BYT3 514 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 TMEM39BQ9GZU3 492 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 CLPBQ9H078 707 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 ERAP1Q9NZ08 941 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 GRID1Q9ULK0 1009 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 MSH4O15457 936 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 DGAT1O75907 488 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 IL18RAPO95256 599 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 SGCGQ13326 291 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 PDIA6Q15084 440 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 E2F7Q96AV8 911 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 GPRC5DQ9NZD1 345 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 SEPT3Q9UH03 358 aa12.17□□□□□ -0.46
SHANK2-201ENST00000338508 KRT33AO76009 404 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 TRIM16LQ309B1 348 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 EFHC1Q5JVL4 640 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 PTAR1Q7Z6K3 402 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 DSG4Q86SJ6 1040 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 MYO1HQ8N1T3 1032 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 KRT35Q92764 455 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 OSBPL8Q9BZF1 889 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 RGS18Q9NS28 235 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 AGPAT5Q9NUQ2 364 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 SMG5Q9UPR3 1016 aaKnown RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 COMTP21964 271 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 CTCFP49711 727 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 RCN1Q15293 331 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 KCNT1Q5JUK3 1230 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 POTEAQ6S8J7 498 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 SETD3Q86TU7 594 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 NT5MQ9NPB1 228 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 USP15Q9Y4E8 981 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 PTPRTO14522 1441 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 TCF7P36402 384 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 CDC42EP1Q00587 391 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 KLC1Q07866 573 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 PRKAG3Q9UGI9 489 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 CDY2AQ9Y6F7 541 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 CDY1Q9Y6F8 540 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 ACOX1Q15067 660 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 KYNUQ16719 465 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 ZNF579Q8NAF0 562 aaKnown RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 ZSWIM2Q8NEG5 633 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 IRX2Q9BZI1 471 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 RMND5AQ9H871 391 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 UVRAGQ9P2Y5 699 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 STON1Q9Y6Q2 735 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 TMEM191CA6NGB0 347 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 CCNT2O60583 730 aaKnown RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 PQBP1O60828 265 aaKnown RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 OR6A2O95222 327 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 MARSP56192 900 aaKnown RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 MMRN1Q13201 1228 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 NFYCQ13952 458 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 EDRF1Q3B7T1 1238 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 POM121L1PQ3SYA9 428 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 NAPEPLDQ6IQ20 393 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 TMC7Q7Z402 723 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 FAM111AQ96PZ2 611 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 ELL3Q9HB65 397 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 LBPP18428 481 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 KLRC2P26717 231 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 KLHL17Q6TDP4 642 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 S100A13Q99584 98 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 TARS2Q9BW92 718 aaKnown RBP12.16□□□□□ -0.46
SHANK2-201ENST00000338508 WDR35Q9P2L0 1181 aa12.16□□□□□ -0.46
SHANK2-201ENST00000338508 TMEM120BA0PK00 339 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms