RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 SLC26A9Q7LBE3 791 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 PIGZQ86VD9 579 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 MAP7D3Q8IWC1 876 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 DCP1BQ8IZD4 617 aaKnown RBP11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 PRELID2Q8N945 189 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 EIF1ADQ8N9N8 165 aaKnown RBP11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 MYLPFQ96A32 169 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 FAM149B1Q96BN6 582 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 CCDC114Q96M63 670 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 HINFPQ9BQA5 517 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 HEMGNQ9BXL5 484 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 MAK16Q9BXY0 300 aaKnown RBP11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 B3GNT5Q9BYG0 378 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 CRISPLD2Q9H0B8 497 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 NGRNQ9NPE2 291 aaKnown RBP11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 PCSK1NQ9UHG2 260 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 PCYOX1Q9UHG3 505 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 USP18Q9UMW8 372 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 ATP11BQ9Y2G3 1177 aa11.41□□□□□ -0.58
MS4A4A-201ENST00000337908 PI4K2BG5E9Z4 385 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 TRUB2O95900 331 aaKnown RBP11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 MIPP30301 263 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 PTPN7P35236 360 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 RPL34P49207 117 aaKnown RBP11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 ATP11AP98196 1134 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 TLE2Q04725 743 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 DSC1Q08554 894 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 NNTQ13423 1086 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 KRT81Q14533 505 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 LLGL1Q15334 1064 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 KAZNQ674X7 775 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 SCYL2Q6P3W7 929 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 CLEC20AQ6ZU45 233 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 SYDE1Q6ZW31 735 aaPredicted RBP11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 ARCQ7LC44 396 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 DEFB128Q7Z7B8 93 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 JAMLQ86YT9 394 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 NPAS4Q8IUM7 802 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 SPATA2LQ8IUW3 424 aaPredicted RBP11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 GSPT2Q8IYD1 628 aaKnown RBP11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 COLGALT2Q8IYK4 626 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 CASKIN2Q8WXE0 1202 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 HSPH1Q92598 858 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 PCED1BQ96HM7 432 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 SCLYQ96I15 445 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 ZNF333Q96JL9 665 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 LRRC19Q9H756 370 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 TMEM39AQ9NV64 488 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 ZNF446Q9NWS9 450 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 STAP1Q9ULZ2 295 aa11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 PRG3Q9Y2Y8 225 aaPredicted RBP11.4□□□□□ -0.58
MS4A4A-201ENST00000337908 ESYT3A0FGR9 886 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 MYBPHLA2RUH7 354 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 DAB1O75553 588 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 DDHD2O94830 711 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 RFC2P35250 354 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 FLT3P36888 993 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 PTPN9P43378 593 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 TKTL1P51854 596 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 SLC25A11Q02978 314 aaKnown RBP11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 FAAP100Q0VG06 881 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 ELAVL2Q12926 359 aaKnown RBP11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 SNX1Q13596 522 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 IKBKEQ14164 716 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 CCNG2Q16589 344 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 SMTNL2Q2TAL5 461 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 BOLA3Q53S33 107 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 C1orf53Q5VUE5 145 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 MFSD7Q6UXD7 560 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 ZNF280BQ86YH2 543 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 RFX6Q8HWS3 928 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 TTC13Q8NBP0 860 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 AENQ8WTP8 325 aaKnown RBP11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 FAM172AQ8WUF8 416 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 C1orf54Q8WWF1 131 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 CFAP57Q96MR6 1250 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 TBCBQ99426 244 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 TMEM175Q9BSA9 504 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 TRIM62Q9BVG3 475 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 UBXN6Q9BZV1 441 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 DCLK3Q9C098 648 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 DPH5Q9H2P9 285 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 C11orf49Q9H6J7 331 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 NFU1Q9UMS0 254 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 FAN1Q9Y2M0 1017 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 NR2E1Q9Y466 385 aa11.39□□□□□ -0.59
MS4A4A-201ENST00000337908 TCRBV7S2A1N4TA0A589 114 aa11.38□□□□□ -0.59
MS4A4A-201ENST00000337908 TBKBP1A7MCY6 615 aa11.38□□□□□ -0.59
MS4A4A-201ENST00000337908 CAPN9O14815 690 aa11.38□□□□□ -0.59
MS4A4A-201ENST00000337908 SYN3O14994 580 aa11.38□□□□□ -0.59
MS4A4A-201ENST00000337908 CXCL10P02778 98 aa11.38□□□□□ -0.59
MS4A4A-201ENST00000337908 ALDH2P05091 517 aa11.38□□□□□ -0.59
MS4A4A-201ENST00000337908 CLTBP09497 229 aa11.38□□□□□ -0.59
MS4A4A-201ENST00000337908 TCF4P15884 667 aa11.38□□□□□ -0.59
MS4A4A-201ENST00000337908 CAPN2P17655 700 aa11.38□□□□□ -0.59
MS4A4A-201ENST00000337908 KDELR1P24390 212 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms