RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 UQCRBP14927 111 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 CDC16Q13042 620 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 LLGL2Q6P1M3 1020 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 CPNE8Q86YQ8 564 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 KBTBD2Q8IY47 623 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 FEZF2Q8TBJ5 459 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 TAS1R2Q8TE23 839 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 PTPRN2Q92932 1015 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 FHDC1Q9C0D6 1143 aaPredicted RBP13.76□□□□□ -0.21
COL2A1-201ENST00000337299 NOL6Q9H6R4 1146 aaKnown RBP13.76□□□□□ -0.21
COL2A1-201ENST00000337299 AP4S1Q9Y587 144 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 IVNS1ABPQ9Y6Y0 642 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 CCDC159P0C7I6 412 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 GZMAP12544 262 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 MPP3Q13368 585 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 ASTE1Q2TB18 679 aaPredicted RBP13.76□□□□□ -0.21
COL2A1-201ENST00000337299 MFSD7Q6UXD7 560 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 STKLD1Q8NE28 680 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 CYP26B1Q9NR63 512 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 DDX56Q9NY93 547 aaKnown RBP13.76□□□□□ -0.21
COL2A1-201ENST00000337299 MID2Q9UJV3 735 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 PLA2G4CQ9UP65 541 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 USP20Q9Y2K6 914 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 AP4B1Q9Y6B7 739 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 KBTBD13C9JR72 458 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 ARL4AP40617 200 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 FASTKD3Q14CZ7 662 aaKnown RBP13.75□□□□□ -0.21
COL2A1-201ENST00000337299 HOMEZQ8IX15 550 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 TSPAN14Q8NG11 270 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 POLR3CQ9BUI4 534 aaPredicted RBP13.75□□□□□ -0.21
COL2A1-201ENST00000337299 LRRC4CQ9HCJ2 640 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 ZDHHC18Q9NUE0 388 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 ORC6Q9Y5N6 252 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 LINC00854A0A1B0GVQ3 168 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 DLGAP3O95886 979 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 TAL1P17542 331 aaPredicted RBP13.75□□□□□ -0.21
COL2A1-201ENST00000337299 ADRA2BP18089 450 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 GJA8P48165 433 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 ALCAMQ13740 583 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 ITGA9Q13797 1035 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 TBCCQ15814 346 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 ADRM1Q16186 407 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 DACH2Q96NX9 599 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 KLHL8Q9P2G9 620 aaPredicted RBP13.75□□□□□ -0.21
COL2A1-201ENST00000337299 COG5Q9UP83 839 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 SIGLEC1Q9BZZ2 1709 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 GSTA4O15217 222 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 OR6B1O95007 311 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 FAM86B2P0C5J1 330 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
COL2A1-201ENST00000337299 LPIN1Q14693 890 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 HEATR6Q6AI08 1181 aaKnown RBP13.75□□□□□ -0.21
COL2A1-201ENST00000337299 ZCCHC9Q8N567 271 aaKnown RBP13.75□□□□□ -0.21
COL2A1-201ENST00000337299 WRNIP1Q96S55 665 aa13.75□□□□□ -0.21
COL2A1-201ENST00000337299 PIH1D1Q9NWS0 290 aaKnown RBP13.75□□□□□ -0.21
COL2A1-201ENST00000337299 ZMYM2Q9UBW7 1377 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 KIF20BQ96Q89 1820 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 ARHGAP23Q9P227 1491 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 TRIM43BA6NCK2 446 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 PROSCO94903 275 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 AQP4P55087 323 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 MAPK6Q16659 721 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 SLC26A11Q86WA9 606 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 CLEC4FQ8N1N0 589 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 HSPBAP1Q96EW2 488 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 APOPT1Q96IL0 206 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 SLC38A10Q9HBR0 1119 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 GPRC5CQ9NQ84 441 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 MAN1C1Q9NR34 630 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 TRNAU1APQ9NX07 287 aaKnown RBP13.74□□□□□ -0.21
COL2A1-201ENST00000337299 EURLQ9NYK6 297 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 FNDC3AQ9Y2H6 1198 aaKnown RBP13.74□□□□□ -0.21
COL2A1-201ENST00000337299 F5H6K3 240 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 INO80B-WBP1J3KQ70 363 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 TRMUO75648 421 aaKnown RBP13.74□□□□□ -0.21
COL2A1-201ENST00000337299 HSPA13P48723 471 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 ACTR2P61160 394 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 ITKQ08881 620 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 SGSM1Q2NKQ1 1148 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 AMIGO2Q86SJ2 522 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 INO80BQ9C086 356 aaPredicted RBP13.74□□□□□ -0.21
COL2A1-201ENST00000337299 IQCA1LA6NCM1 817 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 ZFAND2BQ8WV99 257 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 ATP6V0A1Q93050 837 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 ZFYVE19Q96K21 471 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 TASP1Q9H6P5 420 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 MYRFQ9Y2G1 1151 aa13.74□□□□□ -0.21
COL2A1-201ENST00000337299 BTNL10A8MVZ5 291 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 ECM1Q16610 540 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 CYP2W1Q8TAV3 490 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 PPP1R16BQ96T49 567 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 TIPINQ9BVW5 301 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 TRIM15Q9C019 465 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 CNGB3Q9NQW8 809 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 RPL26L1Q9UNX3 145 aaKnown RBP13.73□□□□□ -0.21
COL2A1-201ENST00000337299 ACTL7BQ9Y614 415 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 CDY2AQ9Y6F7 541 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 CDY1Q9Y6F8 540 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms