RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 METTL5Q9NRN9 209 aaKnown RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 FBXO21O94952 628 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 TGM2P21980 687 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 NUDT2P50583 147 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 CUL2Q13617 745 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 NCF4Q15080 339 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 FIGNQ5HY92 759 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 WDR93Q6P2C0 686 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 STOX1Q6ZVD7 989 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 ATG9AQ7Z3C6 839 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 ARID3BQ8IVW6 561 aaPredicted RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 FAM45AQ8TCE6 357 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 APOL5Q9BWW9 433 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 AAASQ9NRG9 546 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 IPPQ9Y573 584 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 KPNA4O00629 521 aaPredicted RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 ITGAXP20702 1163 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 ATXN3P54252 364 aaPredicted RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 PRKAA2P54646 552 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 SLC29A2Q14542 456 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 TMEM132BQ14DG7 1078 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 DGKDQ16760 1214 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 MAML3Q96JK9 1138 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 SEPT5Q99719 369 aaPredicted RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 THUMPD3Q9BV44 507 aaKnown RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 RNF181Q9P0P0 153 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 ENOPH1Q9UHY7 261 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 DAPK2Q9UIK4 370 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 GYPCP04921 128 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 PDGFRBP09619 1106 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 CYP11B2P19099 503 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 CPT1AP50416 773 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 ZNF177Q13360 481 aaPredicted RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 POLD3Q15054 466 aaPredicted RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 SMAD1Q15797 465 aaKnown RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 MICALL2Q8IY33 904 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 FAM71DQ8N9W8 422 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 DYRK3O43781 588 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 VDRP11473 427 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 CALB2P22676 271 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 BNC2Q6ZN30 1099 aaPredicted RBP13.52□□□□□ -0.24
HLCS-201ENST00000336648 CENPLQ8N0S6 344 aaPredicted RBP13.52□□□□□ -0.24
HLCS-201ENST00000336648 TBC1D16Q8TBP0 767 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 COLEC11Q9BWP8 271 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 NOD2Q9HC29 1040 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 MRPL39Q9NYK5 338 aaKnown RBP13.52□□□□□ -0.24
HLCS-201ENST00000336648 STON1Q9Y6Q2 735 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 A0A0A6YYK5 440 aaPredicted RBP13.52□□□□□ -0.24
HLCS-201ENST00000336648 H7C0S8 307 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 GZMAP12544 262 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 RARGP13631 454 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 VCLP18206 1134 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.24
HLCS-201ENST00000336648 USP39Q53GS9 565 aaKnown RBP13.52□□□□□ -0.24
HLCS-201ENST00000336648 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 NAGPAQ9UK23 515 aa13.52□□□□□ -0.24
HLCS-201ENST00000336648 NCAM1P13591 858 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 PSMC3P17980 439 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 HSD17B3P37058 310 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 ERFP50548 548 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 TGM3Q08188 693 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 UCMAQ8WVF2 138 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 KRT84Q9NSB2 600 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 RNF112Q9ULX5 631 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 PHTF1Q9UMS5 762 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 TM9SF1O15321 606 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.25
HLCS-201ENST00000336648 TSPAN9O75954 239 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 CYP2C9P11712 490 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 CENPAP49450 140 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 NAA30Q147X3 362 aaPredicted RBP13.52□□□□□ -0.25
HLCS-201ENST00000336648 MGAT5BQ3V5L5 792 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 BRINP3Q76B58 766 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 PDCD10Q9BUL8 212 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 ZFYVE28Q9HCC9 887 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 PLA2R1Q13018 1463 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 PDHBP11177 359 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 GYS1P13807 737 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 TALDO1P37837 337 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 RAD23AP54725 363 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 KLHL12Q53G59 568 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 MROH9Q5TGP6 573 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 PLEKHA7Q6IQ23 1121 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 SLC22A9Q8IVM8 553 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 CYP39A1Q9NYL5 469 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 PLAGL2Q9UPG8 496 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 TNS3Q68CZ2 1445 aa13.52□□□□□ -0.25
HLCS-201ENST00000336648 CENPXA8MT69 81 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 LSM8O95777 96 aaKnown RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 FOSL2P15408 326 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 CLEC16AQ2KHT3 1053 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 PRMT9Q6P2P2 845 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 MYO1HQ8N1T3 1032 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.51□□□□□ -0.25
HLCS-201ENST00000336648 TBX20Q9UMR3 447 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms