RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CYP2C8P10632 490 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 CYP3A5P20815 502 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 GBP2P32456 591 aaPredicted RBP18.52■□□□□ 0.55
LRCH3-201ENST00000334859 PCK1P35558 622 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 RGS7P49802 495 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 RBP5P82980 135 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 POU5F1BQ06416 359 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 GALNTL6Q49A17 601 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 SYCP2LQ5T4T6 812 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 SWT1Q5T5J6 900 aaKnown RBP18.52■□□□□ 0.55
LRCH3-201ENST00000334859 C12orf29Q8N999 325 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.52■□□□□ 0.55
LRCH3-201ENST00000334859 LRRC8CQ8TDW0 803 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 RXFP2Q8WXD0 754 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 ACAP3Q96P50 834 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 PHACTR1Q9C0D0 580 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 GRID1Q9ULK0 1009 aa18.52■□□□□ 0.55
LRCH3-201ENST00000334859 ATP11AP98196 1134 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 RNASELQ05823 741 aaKnown RBP18.51■□□□□ 0.55
LRCH3-201ENST00000334859 MGAT5Q09328 741 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 INCA1Q0VD86 236 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 GOLGA7BQ2TAP0 167 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 KLHL38Q2WGJ6 581 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 TRNP1Q6NT89 227 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 KIF12Q96FN5 646 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 NT5C1AQ9BXI3 368 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 ACSS3Q9H6R3 686 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 SLCO1B3Q9NPD5 702 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 RNF181Q9P0P0 153 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 BAIAP2L1Q9UHR4 511 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 PHTF1Q9UMS5 762 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 CHMP2BQ9UQN3 213 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 C2CD4BA6NLJ0 364 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 TSPAN1O60635 241 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 SLC18A1P54219 525 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 KCNJ2P63252 427 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 BNIP1Q12981 228 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 KRT81Q14533 505 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 RASA2Q15283 850 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 SLC1A5Q15758 541 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 PDK4Q16654 411 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 RNF43Q68DV7 783 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 CEP57Q86XR8 500 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 ECHDC2Q86YB7 292 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 LINC01465Q8N7H1 131 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 KLHL29Q96CT2 875 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 C2CD2Q9Y426 696 aa18.51■□□□□ 0.55
LRCH3-201ENST00000334859 CITO14578 2027 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 H7C0C1 242 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 IGF2BP3O00425 579 aaKnown RBP eCLIP18.5■□□□□ 0.55
LRCH3-201ENST00000334859 TYROBPO43914 113 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 ATP6V1G2O95670 118 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 ATP5OP48047 213 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 DPYSL3Q14195 570 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 NOMO1Q15155 1222 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 KYAT1Q16773 422 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 SCYL2Q6P3W7 929 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 C1orf228Q6PIY5 440 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 LCLAT1Q6UWP7 414 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 IFNLR1Q8IU57 520 aaPredicted RBP18.5■□□□□ 0.55
LRCH3-201ENST00000334859 KIF2BQ8N4N8 673 aa18.5■□□□□ 0.55
LRCH3-201ENST00000334859 NGRNQ9NPE2 291 aaKnown RBP18.5■□□□□ 0.55
LRCH3-201ENST00000334859 SBF1O95248 1867 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 E7ESA3 106 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 NQO1P15559 274 aaKnown RBP18.49■□□□□ 0.55
LRCH3-201ENST00000334859 MSH2P43246 934 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 TFDP2Q14188 446 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 SEPT7Q16181 437 aaKnown RBP18.49■□□□□ 0.55
LRCH3-201ENST00000334859 FAM182AQ5T1J6 154 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 LVRNQ6Q4G3 990 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 FAM228AQ86W67 206 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 PPTC7Q8NI37 304 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 STARD13Q9Y3M8 1113 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 LOC102724159A0A0B4J2E5 919 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 SMAPO00193 183 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 ATP2A2P16615 1042 aaKnown RBP18.49■□□□□ 0.55
LRCH3-201ENST00000334859 ADCYAP1R1P41586 468 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 ACVR2BQ13705 512 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 PWP2Q15269 919 aaKnown RBP18.49■□□□□ 0.55
LRCH3-201ENST00000334859 FAM47CQ5HY64 1035 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 TAPT1Q6NXT6 567 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 MTHFD1LQ6UB35 978 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 CYP4V2Q6ZWL3 525 aaPredicted RBP18.49■□□□□ 0.55
LRCH3-201ENST00000334859 MIS12Q9H081 205 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 FAM49BQ9NUQ9 324 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 GPATCH2LQ9NWQ4 482 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 FETUBQ9UGM5 382 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 ZMYND8Q9ULU4 1186 aaPredicted RBP18.49■□□□□ 0.55
LRCH3-201ENST00000334859 GINS2Q9Y248 185 aa18.49■□□□□ 0.55
LRCH3-201ENST00000334859 GOLGA8RI6L899 631 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 ADORA2AP29274 412 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 SHCBP1Q8NEM2 672 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 NOD2Q9HC29 1040 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 HEY1Q9Y5J3 304 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 ZWINTO95229 277 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 STIP1P31948 543 aaKnown RBP18.48■□□□□ 0.55
LRCH3-201ENST00000334859 ELK3P41970 407 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 ADGRD1Q6QNK2 874 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 RGS9BPQ6ZS82 235 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 ACOT1Q86TX2 421 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms