RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 MXRA8Q9BRK3 442 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 CEP44Q9C0F1 390 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 ALG13Q9NP73 1137 aaKnown RBP17.2■□□□□ 0.34
PDZD8-201ENST00000334464 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 TMEM114B3SHH9 223 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 HPGDP15428 266 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 CNGA2Q16280 664 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 ZNF484Q5JVG2 852 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 CACNA2D2Q9NY47 1150 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 GPR182O15218 404 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 STYK1Q6J9G0 422 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 JADE3Q92613 823 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 GANQ9H2C0 597 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 WDCPQ9H6R7 721 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 PDGFRBP09619 1106 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 SHROOM1Q2M3G4 852 aaPredicted RBP17.2■□□□□ 0.34
PDZD8-201ENST00000334464 IFNEQ86WN2 208 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 STARD8Q92502 1023 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 RRN3Q9NYV6 651 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 RPS6KL1Q9Y6S9 549 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 CST8O60676 142 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 RPN2P04844 631 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 CTCFP49711 727 aaPredicted RBP17.2■□□□□ 0.34
PDZD8-201ENST00000334464 NUDT12Q9BQG2 462 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 RPS6KB2Q9UBS0 482 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 CPS1P31327 1500 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 MAP1BP46821 2468 aaKnown RBP17.2■□□□□ 0.34
PDZD8-201ENST00000334464 SMIM31A0A1B0GVY4 71 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 GZMAP12544 262 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 CENPAP49450 140 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 SEL1L3Q68CR1 1132 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 C11orf88Q6PI97 169 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 THUMPD3Q9BV44 507 aaKnown RBP17.2■□□□□ 0.34
PDZD8-201ENST00000334464 NLNQ9BYT8 704 aa17.2■□□□□ 0.34
PDZD8-201ENST00000334464 H3BMM5 538 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 ITGALP20701 1170 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 COMTP21964 271 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 BRINP3Q76B58 766 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 MYO1HQ8N1T3 1032 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 VPS33AQ96AX1 596 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 KPNA6O60684 536 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 TRIM13O60858 407 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 PDHBP11177 359 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 RGS7P49802 495 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 PRKAA2P54646 552 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 ITIH5Q86UX2 942 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 HNRNPLLQ8WVV9 542 aaKnown RBP17.19■□□□□ 0.34
PDZD8-201ENST00000334464 ANKS1AQ92625 1134 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 RGS18Q9NS28 235 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 NCKIPSDQ9NZQ3 722 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 B2RBV5 119 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 GTF2A2P52657 109 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 CASP10Q92851 521 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 REPS1Q96D71 796 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 VCPKMTQ9H867 229 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 STK39Q9UEW8 545 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 AP3M1Q9Y2T2 418 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 C17orf102A2RUQ5 167 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 CCT8P50990 548 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 EFCAB12Q6NXP0 572 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 CENPLQ8N0S6 344 aaPredicted RBP17.19■□□□□ 0.34
PDZD8-201ENST00000334464 PDZK1P1A8MUH7 402 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 VPS4BO75351 444 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 ERVK-10P10266 1014 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 SLC16A1P53985 500 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 MAPK7Q13164 816 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 FAM71DQ8N9W8 422 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 DAGLBQ8NCG7 672 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 SERPINB3P29508 390 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 CCNG1P51959 295 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 MGAT5BQ3V5L5 792 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 RABL6Q3YEC7 729 aaPredicted RBP17.19■□□□□ 0.34
PDZD8-201ENST00000334464 C10orf53Q8N6V4 93 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 GRK2P25098 689 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
PDZD8-201ENST00000334464 MGAT4DA6NG13 374 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 PTPN7P35236 360 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 BARGINQ6ZT62 677 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 FAM49BQ9NUQ9 324 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 POLG2Q9UHN1 485 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
PDZD8-201ENST00000334464 ZNF609O15014 1411 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 RAD23AP54725 363 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 ELAVL2Q12926 359 aaKnown RBP17.18■□□□□ 0.34
PDZD8-201ENST00000334464 CCNI2Q6ZMN8 369 aaPredicted RBP17.18■□□□□ 0.34
PDZD8-201ENST00000334464 C4orf33Q8N1A6 199 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 DPP3Q9NY33 737 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 DYRK1BQ9Y463 629 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
PDZD8-201ENST00000334464 PSMC3P17980 439 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 NUDT2P50583 147 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 GYS2P54840 703 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 ZNF284Q2VY69 593 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 SGO1Q5FBB7 561 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 SRLQ86TD4 932 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 FAM45AQ8TCE6 357 aa17.18■□□□□ 0.34
PDZD8-201ENST00000334464 RBM12Q9NTZ6 932 aaKnown RBP17.18■□□□□ 0.34
PDZD8-201ENST00000334464 BAATQ14032 418 aaPredicted RBP17.18■□□□□ 0.34
PDZD8-201ENST00000334464 NEK10Q6ZWH5 1172 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms