RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 I3L4J1 428 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 MAPK13O15264 365 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 CCL16O15467 120 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 POLR2DO15514 142 aaKnown RBP6.81□□□□□ -1.32
SMG1-201ENST00000330588 KIF20AO95235 890 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 ASGR2P07307 311 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 AOC1P19801 751 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 TUFMP49411 452 aaKnown RBP6.81□□□□□ -1.32
SMG1-201ENST00000330588 AP3M2P53677 418 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 PRKCQQ04759 706 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 DNM1Q05193 864 aaKnown RBP6.81□□□□□ -1.32
SMG1-201ENST00000330588 ADCY1Q08828 1119 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 BECN1Q14457 450 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 NFIL3Q16649 462 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 IQCEQ6IPM2 695 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 GET4Q7L5D6 327 aaPredicted RBP6.81□□□□□ -1.32
SMG1-201ENST00000330588 HS2ST1Q7LGA3 356 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 ITIH5Q86UX2 942 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 EFCAB13Q8IY85 973 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 DCP1BQ8IZD4 617 aaKnown RBP6.81□□□□□ -1.32
SMG1-201ENST00000330588 TOP6BLQ8N6T0 577 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 DNASE1L2Q92874 299 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 ELSPBP1Q96BH3 223 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 MSANTD3Q96H12 275 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 CCDC34Q96HJ3 373 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 ANKRD36BP1Q96IX9 119 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 MEGF10Q96KG7 1140 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 ZNF512Q96ME7 567 aaPredicted RBP6.81□□□□□ -1.32
SMG1-201ENST00000330588 FAM213AQ9BRX8 229 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 GTPBP4Q9BZE4 634 aaKnown RBP6.81□□□□□ -1.32
SMG1-201ENST00000330588 ZCWPW1Q9H0M4 648 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 CYP4F11Q9HBI6 524 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 OBP2AQ9NY56 170 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 RBAKQ9NYW8 714 aaPredicted RBP6.81□□□□□ -1.32
SMG1-201ENST00000330588 DCTN4Q9UJW0 460 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 RNF112Q9ULX5 631 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 YIPF1Q9Y548 306 aa6.81□□□□□ -1.32
SMG1-201ENST00000330588 ZNF318Q5VUA4 2279 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 MTMR11A4FU01 709 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 TISP43B9A030 160 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 CYB561D2O14569 222 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 GABRDO14764 452 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 TGFB1I1O43294 461 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 PRPF6O94906 941 aaKnown RBP6.8□□□□□ -1.32
SMG1-201ENST00000330588 SEC24AO95486 1093 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 VNN2O95498 520 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 GLULP15104 373 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 SP100P23497 879 aaPredicted RBP6.8□□□□□ -1.32
SMG1-201ENST00000330588 MAPK1P28482 360 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 HOXD13P35453 343 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 ALDH1A3P47895 512 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 LHX1P48742 406 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 EPHB3P54753 998 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 STARD6P59095 220 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 RBP5P82980 135 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 MYO1EQ12965 1108 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 PKP1Q13835 747 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 PSMD6Q15008 389 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 NFE2Q16621 373 aaPredicted RBP6.8□□□□□ -1.32
SMG1-201ENST00000330588 KNOP1Q1ED39 458 aaKnown RBP6.8□□□□□ -1.32
SMG1-201ENST00000330588 CYP4A22Q5TCH4 519 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 CENPPQ6IPU0 288 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 ALKBH2Q6NS38 261 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 C1orf228Q6PIY5 440 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 C1orf127Q8N9H9 656 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 FEZF2Q8TBJ5 459 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 DEPDC1BQ8WUY9 529 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 PSMG2Q969U7 264 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 FUBP3Q96I24 572 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMG1-201ENST00000330588 SPATA32Q96LK8 384 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 ACBD6Q9BR61 282 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 CBWD1Q9BRT8 395 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 IER2Q9BTL4 223 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 DDX23Q9BUQ8 820 aaKnown RBP6.8□□□□□ -1.32
SMG1-201ENST00000330588 LRRC3Q9BY71 257 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 FGFBP2Q9BYJ0 223 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 PANK2Q9BZ23 570 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 SMG9Q9H0W8 520 aaKnown RBP6.8□□□□□ -1.32
SMG1-201ENST00000330588 ASAH2Q9NR71 780 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 AGPAT3Q9NRZ7 376 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 INTS13Q9NVM9 706 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 HSPBP1Q9NZL4 362 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 POLIQ9UNA4 740 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 ZDHHC9Q9Y397 364 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 MRPS23Q9Y3D9 190 aaKnown RBP6.8□□□□□ -1.32
SMG1-201ENST00000330588 NUMBLQ9Y6R0 609 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 TCHHQ07283 1943 aa6.8□□□□□ -1.32
SMG1-201ENST00000330588 NUP210Q8TEM1 1887 aaPredicted RBP6.79□□□□□ -1.32
SMG1-201ENST00000330588 PROB1E7EW31 1015 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 PDXKO00764 312 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 PPEF2O14830 753 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 KLRC4O43908 158 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 HUS1O60921 280 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 RHOBTB3O94955 611 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 TNNC2P02585 160 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 PDGFAP04085 211 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 TMEM191BP0C7N4 346 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 PFKFB1P16118 471 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 DDX6P26196 483 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMG1-201ENST00000330588 PCSK1P29120 753 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms