RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SAR1AQ9NR31 198 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 NKX1-2Q9UD57 310 aaPredicted RBP16.06■□□□□ 0.16
BRCC3-201ENST00000330045 DCTN4Q9UJW0 460 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 SUFUQ9UMX1 484 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 CHMP2BQ9UQN3 213 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 PPME1Q9Y570 386 aa16.06■□□□□ 0.16
BRCC3-201ENST00000330045 KIF1CO43896 1103 aaKnown RBP16.05■□□□□ 0.16
BRCC3-201ENST00000330045 MT-ND3P03897 115 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 CALB2P22676 271 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 PTPN4P29074 926 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 RAD23BP54727 409 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 OVGP1Q12889 678 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 ZNF667Q5HYK9 610 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 CLNKQ7Z7G1 428 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 ANKRD13AQ8IZ07 590 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 RFWD2Q8NHY2 731 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 SPATA18Q8TC71 538 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 FAM167AQ96KS9 214 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 ASCC2Q9H1I8 757 aaPredicted RBP16.05■□□□□ 0.16
BRCC3-201ENST00000330045 USP18Q9UMW8 372 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 IQANK1A0A1B0GTG1 560 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 LPXNO60711 386 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 PEX11AO75192 247 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 TRUB2O95900 331 aaKnown RBP16.05■□□□□ 0.16
BRCC3-201ENST00000330045 PROZP22891 400 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 ELK3P41970 407 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 ORC1Q13415 861 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 Q3C1V9 767 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 TSHZ1Q6ZSZ6 1077 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 BZW1Q7L1Q6 419 aaKnown RBP16.05■□□□□ 0.16
BRCC3-201ENST00000330045 ERO1BQ86YB8 467 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 CEP120Q8N960 986 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 KCNV2Q8TDN2 545 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 BCO2Q9BYV7 579 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 LNPEPQ9UIQ6 1025 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 IKBKGQ9Y6K9 419 aa16.05■□□□□ 0.16
BRCC3-201ENST00000330045 SPDYE5A6NIY4 337 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 GAS2O43903 313 aaKnown RBP16.04■□□□□ 0.16
BRCC3-201ENST00000330045 CNMDO75829 334 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 GNAZP19086 355 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 NRLP54845 237 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 ACAP1Q15027 740 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 TMEM132AQ24JP5 1023 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 CTC1Q2NKJ3 1217 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 ATF7IP2Q5U623 682 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 METTL7BQ6UX53 244 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 CDR2LQ86X02 465 aaPredicted RBP16.04■□□□□ 0.16
BRCC3-201ENST00000330045 IGDCC3Q8IVU1 814 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 TRIM55Q9BYV6 548 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 RSAD1Q9HA92 442 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 PTPRHQ9HD43 1115 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 ALG13Q9NP73 1137 aaKnown RBP16.04■□□□□ 0.16
BRCC3-201ENST00000330045 KANSL3Q9P2N6 904 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 CLEC11AQ9Y240 323 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 ANK1P16157 1881 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 HNRNPCL1O60812 293 aaKnown RBP16.04■□□□□ 0.16
BRCC3-201ENST00000330045 TGFB3P10600 412 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 GM2AP17900 193 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 EDNRBP24530 442 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 STIP1P31948 543 aaKnown RBP16.04■□□□□ 0.16
BRCC3-201ENST00000330045 PTK7Q13308 1070 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 LY6KQ17RY6 165 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 WASHC2DQ5SRD0 308 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 DARS2Q6PI48 645 aaKnown RBP16.04■□□□□ 0.16
BRCC3-201ENST00000330045 EEPD1Q7L9B9 569 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 NCAPG2Q86XI2 1143 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 SLC4A11Q8NBS3 891 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 STK32AQ8WU08 396 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 PTPRN2Q92932 1015 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 MCRS1Q96EZ8 462 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 TSSK1BQ9BXA7 367 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 SDCBP2Q9H190 292 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 ASNSD1Q9NWL6 643 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 NUMBLQ9Y6R0 609 aa16.04■□□□□ 0.16
BRCC3-201ENST00000330045 SOWAHBA6NEL2 793 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 ACKR2O00590 384 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 ZNF200P98182 395 aaPredicted RBP16.03■□□□□ 0.16
BRCC3-201ENST00000330045 ROR1Q01973 937 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 PTPN11Q06124 597 aaPredicted RBP16.03■□□□□ 0.16
BRCC3-201ENST00000330045 ZC3H18Q86VM9 953 aaKnown RBP16.03■□□□□ 0.16
BRCC3-201ENST00000330045 LRRC6Q86X45 466 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 ZNF668Q96K58 619 aaPredicted RBP16.03■□□□□ 0.16
BRCC3-201ENST00000330045 ANKRD27Q96NW4 1050 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 TLE6Q9H808 572 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 SIX4Q9UIU6 781 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 MGAMO43451 1857 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 IGKV6-21A0A0C4DH24 114 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 A0A0G2JND7 137 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 TCRBV9S1A1TA0A576 114 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 KBTBD13C9JR72 458 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 E7ENQ6 273 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 INO80B-WBP1J3KQ70 363 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 B4GALT5O43286 388 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 MICAL2O94851 1124 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 PGK2P07205 417 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 INHBAP08476 426 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 TPBGLP0DKB5 382 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 CXCL8P10145 99 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 GABRB2P47870 512 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 MMRN1Q13201 1228 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms