RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 LPIN3Q9BQK8 851 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 RHOBTB2Q9BYZ6 727 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 PIDD1Q9HB75 910 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 APOBEC3GQ9HC16 384 aaKnown RBP17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.39■□□□□ 0.371e-24■■■■■ 211.2
PDLIM1-201ENST00000329399 PCDHB4Q9Y5E5 795 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 INSL5Q9Y5Q6 135 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 MRFAP1Q9Y605 127 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 TECTAO75443 2155 aa17.39■□□□□ 0.37
PDLIM1-201ENST00000329399 NCANO14594 1321 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 CLUHO75153 1309 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 MACROD2A1Z1Q3 448 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 PI4K2BG5E9Z4 385 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 PRRG1O14668 218 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 GABRDO14764 452 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 CTIFO43310 598 aaKnown RBP17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 PAX3P23760 479 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 HOXA9P31269 272 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 NAP1L1P55209 391 aaKnown RBP17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 SLC5A9Q2M3M2 681 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 CCDC149Q6ZUS6 474 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 HS6ST3Q8IZP7 471 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 UBR7Q8N806 425 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 RFFLQ8WZ73 363 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 VCPIP1Q96JH7 1222 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 PKMYT1Q99640 499 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 MRPL45Q9BRJ2 306 aaKnown RBP17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 C11orf16Q9NQ32 467 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 RNF14Q9UBS8 474 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 SAR1BQ9Y6B6 198 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 DENND4AQ7Z401 1863 aa17.38■□□□□ 0.37
PDLIM1-201ENST00000329399 A0A0U1RQJ8 604 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 DYNC1I1O14576 645 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 HUS1O60921 280 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 ABL1P00519 1130 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 FAM163BP0C2L3 166 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 PNMA6AP0CW24 399 aaPredicted RBP17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 MYBL1P10243 752 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 TCP1P17987 556 aaKnown RBP17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 ELF1P32519 619 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 CCR2P41597 374 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 GALCP54803 685 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 TWF1Q12792 350 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 NOP9Q86U38 636 aaKnown RBP17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 SLC47A2Q86VL8 602 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 METTL23Q86XA0 190 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 MNS1Q8NEH6 495 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 OLIG1Q8TAK6 271 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 ATRIPQ8WXE1 791 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 RSAD2Q8WXG1 361 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 DDX1Q92499 740 aaKnown RBP17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 TCEAL4Q96EI5 215 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 BCO2Q9BYV7 579 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 SEPT11Q9NVA2 429 aaKnown RBP17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 DDX43Q9NXZ2 648 aaKnown RBP17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 TRIM10Q9UDY6 481 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 DSEQ9UL01 958 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 KIAA1257Q9ULG3 409 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 DUSP10Q9Y6W6 482 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 PAEPP09466 180 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 ZNF132P52740 706 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 CDH8P55286 799 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 GPC5P78333 572 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 FMO1Q01740 532 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 WDR72Q3MJ13 1102 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 SPOPLQ6IQ16 392 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 ACAD10Q6JQN1 1059 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 ELMSAN1Q6PJG2 1045 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 ADGRF2Q8IZF7 708 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 TOP6BLQ8N6T0 577 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 ZNF518BQ9C0D4 1074 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 LCMT1Q9UIC8 334 aa17.37■□□□□ 0.37
PDLIM1-201ENST00000329399 UQCRHLA0A096LP55 91 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 MYBPHLA2RUH7 354 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 FAM86C2PA6NEL3 165 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 CES2O00748 559 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 MED7O43513 233 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 MOCS3O95396 460 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 LSM8O95777 96 aaKnown RBP17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 FTLP02792 175 aaPredicted RBP17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 UQCRHP07919 91 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 RHOP08100 348 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 PDGFRBP09619 1106 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 CHRNB2P17787 502 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 CKAP4Q07065 602 aaKnown RBP17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 TMEM270Q6UE05 265 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 GET4Q7L5D6 327 aaPredicted RBP17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 THEM5Q8N1Q8 247 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 RBBP8NLQ8NC74 664 aaPredicted RBP17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 STKLD1Q8NE28 680 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 GPR152Q8TDT2 470 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 ING5Q8WYH8 240 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 MMS19Q96T76 1030 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 SDCBP2Q9H190 292 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 CISHQ9NSE2 258 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 UVRAGQ9P2Y5 699 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 NXF1Q9UBU9 619 aaKnown RBP17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 GTF3C4Q9UKN8 822 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 USTQ9Y2C2 406 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 NR2E1Q9Y466 385 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms