RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 TEX264Q9Y6I9 313 aa17.47■□□□□ 0.39
SSH1-201ENST00000326470 CIB2O75838 187 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 LDHAP00338 332 aaKnown RBP17.46■□□□□ 0.39
SSH1-201ENST00000326470 UBTFL6P0CB48 400 aaPredicted RBP17.46■□□□□ 0.39
SSH1-201ENST00000326470 PSMA2P25787 234 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 DSG1Q02413 1049 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 KCNT1Q5JUK3 1230 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 SLFN12LQ6IEE8 588 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 CDHR3Q6ZTQ4 885 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 ZBTB45Q96K62 511 aaPredicted RBP17.46■□□□□ 0.39
SSH1-201ENST00000326470 PANX3Q96QZ0 392 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 CCDC28BQ9BUN5 200 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 STK32BQ9NY57 414 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 PPARGC1AQ9UBK2 798 aaKnown RBP17.46■□□□□ 0.39
SSH1-201ENST00000326470 TAGLN3Q9UI15 199 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 KCNG1Q9UIX4 513 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 CNTNAP2Q9UHC6 1331 aa17.46■□□□□ 0.39
SSH1-201ENST00000326470 LRCH4O75427 683 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 EIF4BP23588 611 aaKnown RBP17.46■□□□□ 0.38
SSH1-201ENST00000326470 CRABP2P29373 138 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 CDH5P33151 784 aaPredicted RBP17.46■□□□□ 0.38
SSH1-201ENST00000326470 AP2B1P63010 937 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 DNAL1Q4LDG9 190 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 CYP4A22Q5TCH4 519 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 TTC39BQ5VTQ0 682 aaPredicted RBP17.46■□□□□ 0.38
SSH1-201ENST00000326470 GPAT2Q6NUI2 795 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 SWSAP1Q6NVH7 229 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 IZUMO2Q6UXV1 221 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 ULK2Q8IYT8 1036 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 ARFGAP1Q8N6T3 406 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 RNF217Q8TC41 542 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 IMPG2Q9BZV3 1241 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 SLC9A2Q9UBY0 812 aa17.46■□□□□ 0.38
SSH1-201ENST00000326470 SEPT9Q9UHD8 586 aaPredicted RBP17.46■□□□□ 0.38
SSH1-201ENST00000326470 COL11A2P13942 1736 aaPredicted RBP17.45■□□□□ 0.38
SSH1-201ENST00000326470 SPECC1L-ADORA2AF8WAN1 911 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 STAM2O75886 525 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 PIGRP01833 764 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 RFC1P35251 1148 aaPredicted RBP17.45■□□□□ 0.38
SSH1-201ENST00000326470 EIF3EP60228 445 aaKnown RBP17.45■□□□□ 0.38
SSH1-201ENST00000326470 YWHAGP61981 247 aaKnown RBP eCLIP17.45■□□□□ 0.38
SSH1-201ENST00000326470 CDK18Q07002 472 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 BST1Q10588 318 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 HADHQ16836 314 aaKnown RBP17.45■□□□□ 0.38
SSH1-201ENST00000326470 ARHGEF16Q5VV41 709 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 SCARA3Q6AZY7 606 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 SLC26A11Q86WA9 606 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 ARHGAP18Q8N392 663 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 KCNN1Q92952 543 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 AZIN2Q96A70 460 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 ECSITQ9BQ95 431 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 WWP1Q9H0M0 922 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 NDE1Q9NXR1 346 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 PLLPQ9Y342 182 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 TRIM49D1C9J1S8 452 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 TBC1D12O60347 775 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 ATG16L1Q676U5 607 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 DEFB132Q7Z7B7 95 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 ARID3BQ8IVW6 561 aaPredicted RBP17.45■□□□□ 0.38
SSH1-201ENST00000326470 DDX50Q9BQ39 737 aaKnown RBP17.45■□□□□ 0.38
SSH1-201ENST00000326470 THTPAQ9BU02 230 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 SLC38A10Q9HBR0 1119 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 GPAMQ9HCL2 828 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 PNPLA8Q9NP80 782 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 ZNF70Q9UC06 446 aaPredicted RBP17.45■□□□□ 0.38
SSH1-201ENST00000326470 SLC7A8Q9UHI5 535 aa17.45■□□□□ 0.38
SSH1-201ENST00000326470 CNTNAP1P78357 1384 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.44■□□□□ 0.38
SSH1-201ENST00000326470 APOC4-APOC2K7ER74 178 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 RNF8O76064 485 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 ASS1P00966 412 aaKnown RBP17.44■□□□□ 0.38
SSH1-201ENST00000326470 APOC2P02655 101 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 C1QAP02745 245 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 CD48P09326 243 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 RBP3P10745 1247 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 E2F7Q96AV8 911 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 GORASP1Q9BQQ3 440 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 MSTO1Q9BUK6 570 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 MECRQ9BV79 373 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 SIRPGQ9P1W8 387 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 PCDHGC3Q9UN70 934 aa17.44■□□□□ 0.38
SSH1-201ENST00000326470 A0A0B4J269 797 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 MCF2LO15068 1137 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 CST3P01034 146 aaPredicted RBP17.43■□□□□ 0.38
SSH1-201ENST00000326470 ATP5BP06576 529 aaKnown RBP17.43■□□□□ 0.38
SSH1-201ENST00000326470 PSAPP07602 524 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 SNRPAP09012 282 aaKnown RBP17.43■□□□□ 0.38
SSH1-201ENST00000326470 WEE2P0C1S8 567 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 ZCCHC18P0CG32 403 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 PRKCEQ02156 737 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 KDSRQ06136 332 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 DYNC1I2Q13409 638 aaKnown RBP17.43■□□□□ 0.38
SSH1-201ENST00000326470 TBCCQ15814 346 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 SLC5A9Q2M3M2 681 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 TMCO4Q5TGY1 634 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 PRPF39Q86UA1 669 aaKnown RBP17.43■□□□□ 0.38
SSH1-201ENST00000326470 CDAN1Q8IWY9 1227 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 KIAA0319LQ8IZA0 1049 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 GPRASP2Q96D09 838 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms