RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 KRT37O76014 449 aa13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 CALB2P22676 271 aa13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 PTPN11Q06124 597 aaPredicted RBP13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 HSDL1Q3SXM5 330 aa13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 DALRD3Q5D0E6 543 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 SESTD1Q86VW0 696 aa13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 IGDCC3Q8IVU1 814 aa13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 STK32AQ8WU08 396 aa13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 NKD2Q969F2 451 aaPredicted RBP13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 TTC1Q99614 292 aa13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 ACSS3Q9H6R3 686 aa13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 NR2E3Q9Y5X4 410 aa13.45□□□□□ -0.26
HMGCS1-201ENST00000325110 SPDYE16A6NNV3 312 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 EIF4BP23588 611 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 PTPN4P29074 926 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 ARL2P36404 184 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 KPNB1Q14974 876 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 EFHC2Q5JST6 749 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 C6orf163Q5TEZ5 329 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 NUDCD3Q8IVD9 361 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 MAP7D3Q8IWC1 876 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 KIAA0319LQ8IZA0 1049 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 PPP1R13LQ8WUF5 828 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 TWNKQ96RR1 684 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 LRMDAQ9H2I8 198 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 DHX35Q9H5Z1 703 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 ZNF395Q9H8N7 513 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 KIF13BQ9NQT8 1826 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 PCNTO95613 3336 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 B2RBV5 119 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 CAPN9O14815 690 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 CCDC22O60826 627 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 PGM1P36871 562 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 ZRSR2Q15696 482 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 CHI3L2Q15782 390 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 LGSNQ5TDP6 509 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 EFCAB12Q6NXP0 572 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 DSTYKQ6XUX3 929 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 BBS12Q6ZW61 710 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 ALYREFQ86V81 257 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 C12orf29Q8N999 325 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 SLC35B2Q8TB61 432 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 FAM149B1Q96BN6 582 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 SERAC1Q96JX3 654 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 CEP41Q9BYV8 373 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 PDLIM7Q9NR12 457 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 CYTH4Q9UIA0 394 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 CYB561D2O14569 222 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 NDC80O14777 642 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 KRT36O76013 467 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 MICAL2O94851 1124 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 LUC7L3O95232 432 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 RBL1P28749 1068 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 RFC5P40937 340 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 PTDSS1P48651 473 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 THOC5Q13769 683 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 LRRC36Q1X8D7 754 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 PLEKHG4Q58EX7 1191 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 ZC3H12AQ5D1E8 599 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 GJC2Q5T442 439 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 LRRC38Q5VT99 294 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 ASRGL1Q7L266 308 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 FBXO16Q8IX29 292 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 NDUFAF2Q8N183 169 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 SLC25A41Q8N5S1 370 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 DENND1AQ8TEH3 1009 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 DNAJC9Q8WXX5 260 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 ACO2Q99798 780 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 TXNDC16Q9P2K2 825 aa13.44□□□□□ -0.26
HMGCS1-201ENST00000325110 SIGLEC16A6NMB1 481 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 E5RJQ4 531 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 SERPINB4P48594 390 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 ACVR2BQ13705 512 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 MOGSQ13724 837 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 TFDP2Q14188 446 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 NBPF20Q3BBV1 942 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 SMC1BQ8NDV3 1235 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 AGR3Q8TD06 166 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 DEPDC1BQ8WUY9 529 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 CCDC124Q96CT7 223 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 SRPK1Q96SB4 655 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 KLC2Q9H0B6 622 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 TYROBPO43914 113 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 CCNB1P14635 433 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 AP3M2P53677 418 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 SESN2P58004 480 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 CRADDP78560 199 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 SURF1Q15526 300 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 MPZL3Q6UWV2 235 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 PRPF39Q86UA1 669 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 FBXO41Q8TF61 875 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 NSL1Q96IY1 281 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 RSAD1Q9HA92 442 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 STOML1Q9UBI4 398 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 G3BP2Q9UN86 482 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 MAFBQ9Y5Q3 323 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 SNCAIPQ9Y6H5 919 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 NFASCO94856 1347 aa13.43□□□□□ -0.26
HMGCS1-201ENST00000325110 APOC4-APOC2K7ER74 178 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms