RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 C10orf88Q9H8K7 445 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 RXFP1Q9HBX9 757 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 DERAQ9Y315 318 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 STARD13Q9Y3M8 1113 aa23.38■■□□□ 1.33
PNKP-201ENST00000322344 DPYSL4O14531 572 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 PRPSAP2O60256 369 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 SETSIPP0DME0 302 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 RNASELQ05823 741 aaKnown RBP23.37■■□□□ 1.33
PNKP-201ENST00000322344 DPYSL3Q14195 570 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 DCAF4L1Q3SXM0 396 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 FAM183BPQ6ZVS7 135 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 ZNF467Q7Z7K2 595 aaPredicted RBP23.37■■□□□ 1.33
PNKP-201ENST00000322344 FAM71DQ8N9W8 422 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 NCAPGQ9BPX3 1015 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 PAIP2Q9BPZ3 127 aaKnown RBP23.37■■□□□ 1.33
PNKP-201ENST00000322344 DHRS4Q9BTZ2 278 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 GBA2Q9HCG7 927 aaPredicted RBP23.37■■□□□ 1.33
PNKP-201ENST00000322344 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.37■■□□□ 1.33
PNKP-201ENST00000322344 XPO7Q9UIA9 1087 aaKnown RBP23.37■■□□□ 1.33
PNKP-201ENST00000322344 EVPLQ92817 2033 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 MGRN1O60291 552 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 CYP3A5P20815 502 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 CCDC15Q0P6D6 951 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 PDK2Q15119 407 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 CGB2Q6NT52 195 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 ADGRD1Q6QNK2 874 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 DPH6Q7L8W6 267 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 PALM2Q8IXS6 379 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 FBXO36Q8NEA4 188 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 USP6NLQ92738 828 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 KIF12Q96FN5 646 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 PLEKHA5Q9HAU0 1116 aa23.37■■□□□ 1.33
PNKP-201ENST00000322344 E5RJQ4 531 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 TYROBPO43914 113 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 ZNF286BP0CG31 522 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 DESP17661 470 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 CA4P22748 312 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 GBP2P32456 591 aaPredicted RBP23.36■■□□□ 1.33
PNKP-201ENST00000322344 SNX16P57768 344 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 BNIP1Q12981 228 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 PDK4Q16654 411 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 MSS51Q4VC12 460 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 BOLA3Q53S33 107 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 DARS2Q6PI48 645 aaKnown RBP23.36■■□□□ 1.33
PNKP-201ENST00000322344 C3orf62Q6ZUJ4 267 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 VSIG1Q86XK7 387 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 MAGEC3Q8TD91 643 aa23.36■■□□□ 1.33
PNKP-201ENST00000322344 H3BRB1 525 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 BANF1O75531 89 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 TMEM63AO94886 807 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 ZWINTO95229 277 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 ADORA2AP29274 412 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 ELF3P78545 371 aaPredicted RBP23.35■■□□□ 1.33
PNKP-201ENST00000322344 GAD2Q05329 585 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 CBLBQ13191 982 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 GOLGA7BQ2TAP0 167 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 CYP4V2Q6ZWL3 525 aaPredicted RBP23.35■■□□□ 1.33
PNKP-201ENST00000322344 C4orf33Q8N1A6 199 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.35■■□□□ 1.33
PNKP-201ENST00000322344 TEKT4Q8WW24 435 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 TUT1Q9H6E5 874 aaKnown RBP23.35■■□□□ 1.33
PNKP-201ENST00000322344 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.35■■□□□ 1.33
PNKP-201ENST00000322344 PFKMP08237 780 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 SSTR1P30872 391 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 BASP1P80723 227 aaKnown RBP23.35■■□□□ 1.33
PNKP-201ENST00000322344 KRT81Q14533 505 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 BBS9Q3SYG4 887 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 FBF1Q8TES7 1133 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 ALKBH8Q96BT7 664 aaKnown RBP23.35■■□□□ 1.33
PNKP-201ENST00000322344 RNF157Q96PX1 679 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 TBCBQ99426 244 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 KIF9Q9HAQ2 790 aa23.35■■□□□ 1.33
PNKP-201ENST00000322344 CFAP69A5D8W1 941 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 CYP2C8P10632 490 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 GJA5P36382 358 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 NCALDP61601 193 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 GRIK4Q16099 956 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 LDLRAD1Q5T700 205 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 HHATQ5VTY9 493 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 TRNP1Q6NT89 227 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 LRRC8CQ8TDW0 803 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 PAFAH2Q99487 392 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 FRMD8Q9BZ67 464 aaPredicted RBP23.34■■□□□ 1.33
PNKP-201ENST00000322344 ECT2Q9H8V3 914 aa23.34■■□□□ 1.33
PNKP-201ENST00000322344 TCRBV7S3A2A0A539 114 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 STRNO43815 780 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 SPAG6O75602 509 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 TGM2P21980 687 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 RPA3P35244 121 aaPredicted RBP23.33■■□□□ 1.33
PNKP-201ENST00000322344 ADCYAP1R1P41586 468 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 MSH2P43246 934 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 MMRN1Q13201 1228 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 WDR83Q9BRX9 315 aaKnown RBP23.33■■□□□ 1.33
PNKP-201ENST00000322344 KATNBL1Q9H079 304 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 PAK5Q9P286 719 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 PLXNA1Q9UIW2 1896 aa23.33■■□□□ 1.33
PNKP-201ENST00000322344 A0A1W2PPM1 405 aa23.33■■□□□ 1.32
PNKP-201ENST00000322344 CHADO15335 359 aa23.33■■□□□ 1.32
PNKP-201ENST00000322344 GTF2A1P52655 376 aaPredicted RBP23.33■■□□□ 1.32
PNKP-201ENST00000322344 C15orf59Q2T9L4 293 aaPredicted RBP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms