RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 FLT3P36888 993 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 CDK7P50613 346 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 NEDD8Q15843 81 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 ANGPTL8Q6UXH0 198 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 TDRD5Q8NAT2 981 aaKnown RBP7.31□□□□□ -1.24
SMC1A-201ENST00000322213 SUN5Q8TC36 379 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 ATXN7L3BQ96GX2 97 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 DCLK3Q9C098 648 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 DGKIO75912 1065 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 EYA4O95677 639 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 AKR1B1P15121 316 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 PHKG2P15735 406 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 GRK2P25098 689 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 CDH6P55285 790 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 SLC7A3Q8WY07 619 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 FAM162AQ96A26 154 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 FAM20AQ96MK3 541 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 REXO4Q9GZR2 422 aaKnown RBP7.31□□□□□ -1.24
SMC1A-201ENST00000322213 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.31□□□□□ -1.24
SMC1A-201ENST00000322213 ATP6V1HQ9UI12 483 aa7.31□□□□□ -1.24
SMC1A-201ENST00000322213 TRIM49D1C9J1S8 452 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ZBTB39O15060 712 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ATMINO43313 823 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ZNF862O60290 1169 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RPL21P46778 160 aaKnown RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SLC1A6P48664 564 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 BCAR1P56945 870 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 USP46P62068 366 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ZNF846Q147U1 533 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 CERKLQ49MI3 558 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 KCNT1Q5JUK3 1230 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 OR7A2PQ8NGA2 310 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 PGBD4Q96DM1 585 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 TUFT1Q9NNX1 390 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 PPME1Q9Y570 386 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 OVOS2A0A0J9YW53 1432 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 OVOS2Q6IE36 1432 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 MKRN4PQ13434 485 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 KCTD21Q4G0X4 260 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RTKN2Q8IZC4 609 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 C17orf80Q9BSJ5 609 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 EIF4BP23588 611 aaKnown RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RPA3P35244 121 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 CHRNA2Q15822 529 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ABRAXAS1Q6UWZ7 409 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 MINDY2Q8NBR6 621 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 IARS2Q9NSE4 1012 aaKnown RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 MAD2L2Q9UI95 211 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SORBS3O60504 671 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SHBGP04278 402 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 GZMAP12544 262 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 GYS1P13807 737 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 HADHAP40939 763 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ATXN3P54252 364 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 DRG2P55039 364 aaKnown RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RRP1BQ14684 758 aaKnown RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 KYAT3Q6YP21 454 aaKnown RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 C11orf70Q9BRQ4 267 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 TMEM117Q9H0C3 514 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 TCF7L2Q9NQB0 619 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RAB6BQ9NRW1 208 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 MAGED2Q9UNF1 606 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 PRR23AA6NEV1 266 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RHOBTB1O94844 696 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 A1BGP04217 495 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SERPINA6P08185 405 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 WEE2P0C1S8 567 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RARAP10276 462 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 QPCTQ16769 361 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SPICE1Q8N0Z3 855 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 KCTD17Q8N5Z5 321 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 EXD1Q8NHP7 514 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 CCDC126Q96EE4 140 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ZNF512BQ96KM6 892 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 MKNK1Q9BUB5 465 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ANO3Q9BYT9 981 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 TBCCD1Q9NVR7 557 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SALL3Q9BXA9 1300 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SLCO1B7G3V0H7 640 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 C2CD2LO14523 706 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 KCNJ1P48048 391 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 TOB1P50616 345 aaPredicted RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 PRELPP51888 382 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 CCDC81Q6ZN84 652 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 ERO1BQ86YB8 467 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 GRPEL2Q8TAA5 225 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 SLC30A5Q8TAD4 765 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 KRT35Q92764 455 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 PICK1Q9NRD5 415 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 LMCD1Q9NZU5 365 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 CDV3Q9UKY7 258 aaKnown RBP7.3□□□□□ -1.24
SMC1A-201ENST00000322213 TELO2Q9Y4R8 837 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 A8MUI8 341 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RNF103O00237 685 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RGL2O15211 777 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 NFKBIAP25963 317 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 POU5F1BQ06416 359 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 TRAF2Q12933 501 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 MMRN1Q13201 1228 aa7.3□□□□□ -1.24
SMC1A-201ENST00000322213 RASSF5Q8WWW0 418 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms